RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 ZMAT4Q9H898 229 aa6.07□□□□□ -1.44
MBD4-209ENST00000511009 FBLN5Q9UBX5 448 aa6.07□□□□□ -1.44
MBD4-209ENST00000511009 MSRAQ9UJ68 235 aa6.07□□□□□ -1.44
MBD4-209ENST00000511009 ACSL6Q9UKU0 697 aa6.07□□□□□ -1.44
MBD4-209ENST00000511009 PCDHB4Q9Y5E5 795 aa6.07□□□□□ -1.44
MBD4-209ENST00000511009 LCHNA4D1U4 455 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 FITM1A5D6W6 292 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 TRIM75PA6NK02 468 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 VSTM5A8MXK1 200 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 FOXP2O15409 715 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 BUB1BO60566 1050 aaPredicted RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 PTPN1P18031 435 aaKnown RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 TXKP42681 527 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 FNTBP49356 437 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 CYP4F8P98187 520 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 TUSC3Q13454 348 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 OGFOD2Q6N063 350 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 ESRP1Q6NXG1 681 aaKnown RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 ATG4DQ86TL0 474 aaPredicted RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 NME9Q86XW9 330 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 CERS3Q8IU89 383 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 TRIM48Q8IWZ4 208 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 RBM12BQ8IXT5 1001 aaKnown RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 CMTR2Q8IYT2 770 aaKnown RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 TGFBRAP1Q8WUH2 860 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 PMM1Q92871 262 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 LRGUKQ96M69 825 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 ARNT2Q9HBZ2 717 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 PRDM11Q9NQV5 511 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 CCM2LQ9NUG4 571 aaPredicted RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 DNAJC28Q9NX36 388 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 USP36Q9P275 1121 aaKnown RBP6.06□□□□□ -1.44
MBD4-209ENST00000511009 RCAN3Q9UKA8 241 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 NUDT5Q9UKK9 219 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
MBD4-209ENST00000511009 TADA3O75528 432 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 LTFP02788 710 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 ARL4AP40617 200 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 GPR3P46089 330 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 GTF2H3Q13889 308 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 UBE4AQ14139 1066 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 ODF1Q14990 250 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 BRD3Q15059 726 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 PDCD1Q15116 288 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 EPHA7Q15375 998 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 SLC23A3Q6PIS1 610 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 DGKHQ86XP1 1220 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 C7orf31Q8N865 590 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 NETO2Q8NC67 525 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 FLAD1Q8NFF5 587 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 ERCC4Q92889 916 aaPredicted RBP6.05□□□□□ -1.44
MBD4-209ENST00000511009 PLCD4Q9BRC7 762 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 PRDM7Q9NQW5 492 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 C19orf73Q9NVV2 129 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 OBP2AQ9NY56 170 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 ASH2LQ9UBL3 628 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 ZBTB21Q9ULJ3 1066 aa6.05□□□□□ -1.44
MBD4-209ENST00000511009 FAM90A27PA6NNH2 459 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA12O60330 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 TMEM253P0C7T8 217 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 HSPA6P17066 643 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 SDHAP31040 664 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 EPHA5P54756 1037 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 KIR3DS1Q14943 382 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 SEC23AQ15436 765 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 ARHGAP29Q52LW3 1261 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 ESPNLQ6ZVH7 1005 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 MILR1Q7Z6M3 343 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 EXOC8Q8IYI6 725 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 POU5F2Q8N7G0 328 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 TEKT5Q96M29 485 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 RPS6KC1Q96S38 1066 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 NUP88Q99567 741 aaPredicted RBP6.04□□□□□ -1.44
MBD4-209ENST00000511009 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
MBD4-209ENST00000511009 GPR160Q9UJ42 338 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 DBR1Q9UK59 544 aaKnown RBP6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA9Q9Y5G4 932 aaKnown RBP6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA8Q9Y5G5 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA7Q9Y5G6 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA6Q9Y5G7 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA3Q9Y5H0 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 PCDHGA2Q9Y5H1 932 aa6.04□□□□□ -1.44
MBD4-209ENST00000511009 ERC2O15083 957 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 C4BPAP04003 597 aaKnown RBP6.03□□□□□ -1.44
MBD4-209ENST00000511009 GLI4P10075 376 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 ENPP1P22413 925 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 GRIN1Q05586 938 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 UGT8Q16880 541 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 CATSPEREQ5SY80 951 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 SYCP2LQ5T4T6 812 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 IFIT1BQ5T764 474 aaKnown RBP6.03□□□□□ -1.44
MBD4-209ENST00000511009 TIGD7Q6NT04 549 aaPredicted RBP6.03□□□□□ -1.44
MBD4-209ENST00000511009 CXorf67Q86X51 503 aaPredicted RBP6.03□□□□□ -1.44
MBD4-209ENST00000511009 PHYKPLQ8IUZ5 450 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 FERMT2Q96AC1 680 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 E2F7Q96AV8 911 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 PEX11GQ96HA9 241 aa6.03□□□□□ -1.44
MBD4-209ENST00000511009 ZNF496Q96IT1 587 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms