RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 STYK1Q6J9G0 422 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 PALM2Q8IXS6 379 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 STPG3Q8N7X2 389 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 C3P01024 1663 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 SETD1BQ9UPS6 1966 aaKnown RBP10.18□□□□□ -0.78
USP53-206ENST00000510737 GNAT1P11488 350 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 GPR85P60893 370 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 GPR155Q7Z3F1 870 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 FAM9AQ8IZU1 332 aaPredicted RBP10.18□□□□□ -0.78
USP53-206ENST00000510737 SH3RF2Q8TEC5 729 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 PTPN22Q9Y2R2 807 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
USP53-206ENST00000510737 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
USP53-206ENST00000510737 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 TCRBV5S4A2TA0A5A2 114 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 PLEKHD1A6NEE1 506 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 TOM1O60784 492 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 CSF2RBP32927 897 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 EPHA5P54756 1037 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.17□□□□□ -0.78
USP53-206ENST00000510737 Q8TCH9 128 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 AJUBAQ96IF1 538 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 IPPKQ9H8X2 491 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 DSEQ9UL01 958 aa10.17□□□□□ -0.78
USP53-206ENST00000510737 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 CAMSAP1Q5T5Y3 1602 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 ALKQ9UM73 1620 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 SOD2P04179 222 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 TACR2P21452 398 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 SLC43A3Q8NBI5 491 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 GNRHR2Q96P88 292 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 ZFYVE21Q9BQ24 234 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 CD244Q9BZW8 370 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 ARHGAP20Q9P2F6 1191 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
USP53-206ENST00000510737 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 ZNF839A8K0R7 811 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 CHGBP05060 677 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 IFNL3Q8IZI9 196 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP53-206ENST00000510737 ZNF747Q9BV97 191 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 DEF6Q9H4E7 631 aa10.15□□□□□ -0.78
USP53-206ENST00000510737 ZNF623O75123 536 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 SLPIP03973 132 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 KCTD1Q719H9 257 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 RALYLQ86SE5 291 aaKnown RBP10.14□□□□□ -0.79
USP53-206ENST00000510737 ST13P5Q8NFI4 369 aaPredicted RBP10.14□□□□□ -0.79
USP53-206ENST00000510737 KATNBL1Q9H079 304 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 TRAF6Q9Y4K3 522 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 SLC4A7Q9Y6M7 1214 aa10.14□□□□□ -0.79
USP53-206ENST00000510737 FBXO21O94952 628 aa10.13□□□□□ -0.79
USP53-206ENST00000510737 ENO2P09104 434 aaPredicted RBP10.13□□□□□ -0.79
USP53-206ENST00000510737 SELENOPP49908 381 aa10.13□□□□□ -0.79
USP53-206ENST00000510737 RAB33AQ14088 237 aa10.13□□□□□ -0.79
USP53-206ENST00000510737 SORCS2Q96PQ0 1159 aa10.13□□□□□ -0.79
USP53-206ENST00000510737 TACO1Q9BSH4 297 aaKnown RBP10.13□□□□□ -0.79
USP53-206ENST00000510737 TRAV20A0A0B4J274 112 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 IQCA1LA6NCM1 817 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 FOXS1O43638 330 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 ZNF888P0CJ79 500 aaPredicted RBP10.12□□□□□ -0.79
USP53-206ENST00000510737 SPDYAQ5MJ70 313 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 AFAP1Q8N556 730 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
USP53-206ENST00000510737 SLC39A2Q9NP94 309 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 SRRDQ9UH36 339 aa10.12□□□□□ -0.79
USP53-206ENST00000510737 SETD1AO15047 1707 aaKnown RBP10.12□□□□□ -0.79
USP53-206ENST00000510737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.12□□□□□ -0.79
USP53-206ENST00000510737 AMHP03971 560 aa10.11□□□□□ -0.79
USP53-206ENST00000510737 ACVRL1P37023 503 aa10.11□□□□□ -0.79
USP53-206ENST00000510737 IFRD2Q12894 506 aaPredicted RBP10.11□□□□□ -0.79
USP53-206ENST00000510737 TCTN3Q6NUS6 607 aa10.11□□□□□ -0.79
USP53-206ENST00000510737 SPATC1Q76KD6 591 aa10.11□□□□□ -0.79
USP53-206ENST00000510737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.1□□□□□ -0.79
USP53-206ENST00000510737 FAM47E-STBD1D6RA91 191 aa10.1□□□□□ -0.79
USP53-206ENST00000510737 SEC61A2Q9H9S3 476 aa10.1□□□□□ -0.79
USP53-206ENST00000510737 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
USP53-206ENST00000510737 TCOF1Q13428 1488 aaKnown RBP10.1□□□□□ -0.79
USP53-206ENST00000510737 FAM90A27PA6NNH2 459 aa10.09□□□□□ -0.79
USP53-206ENST00000510737 LRRC37BQ96QE4 947 aa10.09□□□□□ -0.79
USP53-206ENST00000510737 VPS11Q9H270 941 aa10.09□□□□□ -0.79
USP53-206ENST00000510737 TCAF1Q9Y4C2 921 aa10.09□□□□□ -0.79
USP53-206ENST00000510737 PLA2R1Q13018 1463 aa10.09□□□□□ -0.79
USP53-206ENST00000510737 ZNF142P52746 1687 aaPredicted RBP10.09□□□□□ -0.79
USP53-206ENST00000510737 PLCH2O75038 1416 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 H0Y858 1186 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 MUSKO15146 869 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 ADCY3O60266 1144 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 DBPQ10586 325 aaPredicted RBP10.08□□□□□ -0.8
USP53-206ENST00000510737 FOXB2Q5VYV0 432 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 ZFPM1Q8IX07 1006 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 LRRC47Q8N1G4 583 aaKnown RBP10.08□□□□□ -0.8
USP53-206ENST00000510737 LMF1Q96S06 567 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 MSRB2Q9Y3D2 182 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
USP53-206ENST00000510737 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
USP53-206ENST00000510737 DIP2CQ9Y2E4 1556 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms