RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PEX19P40855 299 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 ITPK1Q13572 414 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 GJB7Q6PEY0 223 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 TAOK1Q7L7X3 1001 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 MYCBPAPQ8TBZ2 947 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 NEK9Q8TD19 979 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 ZMYND12Q9H0C1 365 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 METTL14Q9HCE5 456 aaKnown RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 RASA1P20936 1047 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 STX2P32856 288 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 LRRC14Q15048 493 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 CCDC6Q16204 474 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 PROM2Q8N271 834 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 GDAP1Q8TB36 358 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 HVCN1Q96D96 273 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 PSMD1Q99460 953 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
USP38-202ENST00000510377 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
USP38-202ENST00000510377 ZNF263O14978 683 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CYTH3O43739 400 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 ACSL3O95573 720 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 FERP16591 822 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CDC37Q16543 378 aaPredicted RBP16.17■□□□□ 0.18
USP38-202ENST00000510377 PPM1KQ8N3J5 372 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.17■□□□□ 0.181e-9■■■■■ 46.5
USP38-202ENST00000510377 ARHGAP23Q9P227 1491 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 HSD17B3P37058 310 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CACNB3P54284 484 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 ODR4Q5SWX8 454 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 ANKS1AQ92625 1134 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CALRP27797 417 aaKnown RBP16.17■□□□□ 0.18
USP38-202ENST00000510377 CTTNQ14247 550 aaKnown RBP16.17■□□□□ 0.18
USP38-202ENST00000510377 NAB2Q15742 525 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 SLFN13Q68D06 897 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 USP38Q8NB14 1042 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
USP38-202ENST00000510377 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 TRIM68Q6AZZ1 485 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
USP38-202ENST00000510377 TTLL1O95922 423 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 BCRP11274 1271 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 FBF1Q8TES7 1133 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 HOMER3Q9NSC5 361 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP38-202ENST00000510377 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 BANK1Q8NDB2 785 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 SERPINB13Q9UIV8 391 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 CCDC188H7C350 402 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 NR3C1P04150 777 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 AKR1B1P15121 316 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 SETDB1Q15047 1291 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 MIIPQ5JXC2 388 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 RCSD1Q6JBY9 416 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 ANO3Q9BYT9 981 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 ACTR5Q9H9F9 607 aaPredicted RBP16.16■□□□□ 0.18
USP38-202ENST00000510377 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
USP38-202ENST00000510377 PNMA6FA0A0J9YX94 578 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 ZBTB16Q05516 673 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 SBK1Q52WX2 424 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 NSMFQ6X4W1 530 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 FBXO33Q7Z6M2 555 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 TAB3Q8N5C8 712 aaPredicted RBP16.15■□□□□ 0.18
USP38-202ENST00000510377 TNFRSF25Q93038 417 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 GRID2IPA4D2P6 1211 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 GAS7O60861 476 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 UCHL3P15374 230 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 LMNB1P20700 586 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 PDE6BP35913 854 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 KIAA0825Q8IV33 1275 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 NEDD1Q8NHV4 660 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 IFT74Q96LB3 600 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 AGPSO00116 658 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 ATP11AP98196 1134 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 BIRC3Q13489 604 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 UAP1Q16222 522 aaPredicted RBP16.15■□□□□ 0.18
USP38-202ENST00000510377 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
USP38-202ENST00000510377 SLFN12Q8IYM2 578 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 CXorf56Q9H5V9 222 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 CEP83Q9Y592 693 aa16.15■□□□□ 0.18
USP38-202ENST00000510377 RASGRF2O14827 1237 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 MYL7Q01449 175 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
USP38-202ENST00000510377 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
USP38-202ENST00000510377 ADGRF4Q8IZF3 695 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms