RNA–Protein interactions for RNA: ENST00000509030.5

TNPO1-207, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-207ENST00000509030 LSSP48449 732 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 MASP1P48740 699 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 GJA9P57773 515 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 SMAD4Q13485 552 aaKnown RBP6.24□□□□□ -1.41
TNPO1-207ENST00000509030 FAM26FQ5R3K3 315 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 TRMT10BQ6PF06 316 aaKnown RBP6.24□□□□□ -1.41
TNPO1-207ENST00000509030 BORAQ6PGQ7 559 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 IFT22Q9H7X7 185 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 TOMM22Q9NS69 142 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 GALNT8Q9NY28 637 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 APOBEC2Q9Y235 224 aaKnown RBP6.24□□□□□ -1.41
TNPO1-207ENST00000509030 SPO11Q9Y5K1 396 aa6.24□□□□□ -1.41
TNPO1-207ENST00000509030 H0Y858 1186 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 TRAF5O00463 557 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 CUTAO60888 179 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 ULK1O75385 1050 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
TNPO1-207ENST00000509030 KCNC1P48547 511 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 EPHA7Q15375 998 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 WDR72Q3MJ13 1102 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 C7orf31Q8N865 590 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 RPGRQ92834 1020 aaKnown RBP6.23□□□□□ -1.41
TNPO1-207ENST00000509030 BTBD2Q9BX70 525 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 TMEM168Q9H0V1 697 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 LUC7LQ9NQ29 371 aaKnown RBP6.23□□□□□ -1.41
TNPO1-207ENST00000509030 USP40Q9NVE5 1235 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 THG1LQ9NWX6 298 aaKnown RBP6.23□□□□□ -1.41
TNPO1-207ENST00000509030 USP36Q9P275 1121 aaKnown RBP6.23□□□□□ -1.41
TNPO1-207ENST00000509030 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 TELO2Q9Y4R8 837 aa6.23□□□□□ -1.41
TNPO1-207ENST00000509030 A0A087X0B3 334 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 UBA6A0AVT1 1052 aaPredicted RBP6.22□□□□□ -1.41
TNPO1-207ENST00000509030 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 ACOT7O00154 380 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 LSP1P33241 339 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 GLRBP48167 497 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 TTC38Q5R3I4 469 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 LIPIQ6XZB0 460 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 CARFQ8N187 725 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
TNPO1-207ENST00000509030 ZSWIM3Q96MP5 696 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 NOX5Q96PH1 765 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 FOXB1Q99853 325 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 OXSMQ9NWU1 459 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
TNPO1-207ENST00000509030 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.22□□□□□ -1.41
TNPO1-207ENST00000509030 ST20-MTHFSA0A0A6YYL1 179 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
TNPO1-207ENST00000509030 MMEP08473 750 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 APEX1P27695 318 aaKnown RBP6.21□□□□□ -1.42
TNPO1-207ENST00000509030 CFPP27918 469 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 IL13P35225 146 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ECE1P42892 770 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ADAM9Q13443 819 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ATP13A4Q4VNC1 1196 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 GPR158Q5T848 1215 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 THNSL2Q86YJ6 484 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 PHYKPLQ8IUZ5 450 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 SMC1BQ8NDV3 1235 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ATL2Q8NHH9 583 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ASB15Q8WXK1 588 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 ERCC4Q92889 916 aaPredicted RBP6.21□□□□□ -1.42
TNPO1-207ENST00000509030 GPR101Q96P66 508 aaPredicted RBP6.21□□□□□ -1.42
TNPO1-207ENST00000509030 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
TNPO1-207ENST00000509030 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 FKBP9O95302 570 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
TNPO1-207ENST00000509030 ZBTB48P10074 688 aaPredicted RBP6.2□□□□□ -1.42
TNPO1-207ENST00000509030 ATP2A2P16615 1042 aaKnown RBP6.2□□□□□ -1.42
TNPO1-207ENST00000509030 NFKB2Q00653 900 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 DSG1Q02413 1049 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 LRRC32Q14392 662 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 PCBP1Q15365 356 aaKnown RBP eCLIP6.2□□□□□ -1.42
TNPO1-207ENST00000509030 SURF1Q15526 300 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 FKBP9P1Q75LS8 142 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 OTOP2Q7RTS6 562 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 STK32CQ86UX6 486 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 TUBGCP5Q96RT8 1024 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 MTFR1LQ9H019 292 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 OR10A5Q9H207 317 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 ZCCHC4Q9H5U6 513 aa6.2□□□□□ -1.42
TNPO1-207ENST00000509030 EPB41L4AQ9HCS5 686 aaPredicted RBP6.2□□□□□ -1.42
TNPO1-207ENST00000509030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.19□□□□□ -1.42
TNPO1-207ENST00000509030 GOLGA6L22H0YM25 854 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.421e-9■■□□□ 11.7
TNPO1-207ENST00000509030 BCAR1P56945 870 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 SESN2P58004 480 aaPredicted RBP6.19□□□□□ -1.42
TNPO1-207ENST00000509030 SESN3P58005 492 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 STRN3Q13033 797 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 DDB1Q16531 1140 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 RNF180Q86T96 592 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 PROSER1Q86XN7 944 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 NXPE1Q8N323 547 aa6.19□□□□□ -1.42
TNPO1-207ENST00000509030 KLHL36Q8N4N3 616 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms