RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 PDXDC2PQ6P474 469 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 RUFY3Q7L099 469 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 NME8Q8N427 588 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 UIMC1Q96RL1 719 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 PCYT2Q99447 389 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 ZNF302Q9NR11 478 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
UBE2D3-227ENST00000508818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 FAM86B1E9PN63 330 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 ENPP3O14638 875 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 EPB41L2O43491 1005 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 HBP1O60381 514 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 LPXNO60711 386 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 PPFIA3O75145 1194 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 ATG7O95352 703 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 FAM86B2P0C5J1 330 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 IFNAR1P17181 557 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 PDIA3P30101 505 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 NLRP5P59047 1200 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 SETQ01105 290 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 SSRP1Q08945 709 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 PRR16Q569H4 304 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 FBXO47Q5MNV8 452 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 SWSAP1Q6NVH7 229 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 TSHZ1Q6ZSZ6 1077 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 FIBCD1Q8N539 461 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 TRAPPC12Q8WVT3 735 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 OSBPL7Q9BZF2 842 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 TRPV2Q9Y5S1 764 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
UBE2D3-227ENST00000508818 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 CCNE2O96020 404 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 PSAPP07602 524 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 KLRC1P26715 233 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 CD52P31358 61 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 KRT76Q01546 638 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 MGAT3Q09327 533 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 PAK2Q13177 524 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 GPM6BQ13491 265 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 PKN1Q16512 942 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 MTHFD1LQ6UB35 978 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 ABHD15Q6UXT9 468 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 TRMT1LQ7Z2T5 733 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 TMEM192Q8IY95 271 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 ATP8B4Q8TF62 1192 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 CELF4Q9BZC1 486 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 GINS2Q9Y248 185 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 SQORQ9Y6N5 450 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 CDH23Q9H251 3354 aa11.44□□□□□ -0.58
UBE2D3-227ENST00000508818 PTPRSQ13332 1948 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 IGLV3-22A0A075B6J6 115 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 IGKV6D-21A0A0A0MT36 114 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 SMIM35A0A1B0GVV1 85 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 DHX15O43143 795 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 STAG3L1P0CL83 205 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 BMP1P13497 986 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 IBSPP21815 317 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 KCNQ1P51787 676 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 EVCP57679 992 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 NFX1Q12986 1120 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 NTRK3Q16288 839 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 ZNF746Q6NUN9 644 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 SMAP1Q8IYB5 467 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 C22orf23Q9BZE7 217 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 PDRG1Q9NUG6 133 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
UBE2D3-227ENST00000508818 COL1A2P08123 1366 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 NID2Q14112 1375 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 H3BNC9 293 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 DEXIO95424 95 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 RB1P06400 928 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 CTNNB1P35222 781 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 USP11P51784 963 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 STK3Q13188 491 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 CCDC60Q8IWA6 550 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-227ENST00000508818 METTL13Q8N6R0 699 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms