RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PCYT2Q99447 389 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 JPH2Q9BR39 696 aaPredicted RBP10.26□□□□□ -0.77
NUP54-207ENST00000508583 TRPV6Q9H1D0 765 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 RNPEPQ9H4A4 650 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.26□□□□□ -0.77
NUP54-207ENST00000508583 TUBE1Q9UJT0 475 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 ZMYND8Q9ULU4 1186 aaPredicted RBP10.26□□□□□ -0.77
NUP54-207ENST00000508583 ATP6V1DQ9Y5K8 247 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
NUP54-207ENST00000508583 CEP290O15078 2479 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 H0YGN5 161 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 M0QZ92 97 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 MAGEB2O15479 319 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 PFKMP08237 780 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 INSRRP14616 1297 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 SYN1P17600 705 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 MUTP22033 750 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 TMOD1P28289 359 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 TOB1P50616 345 aaPredicted RBP10.25□□□□□ -0.77
NUP54-207ENST00000508583 ATP2C1P98194 919 aaPredicted RBP10.25□□□□□ -0.77
NUP54-207ENST00000508583 PRKCEQ02156 737 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 RBL2Q08999 1139 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 PDIA5Q14554 519 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 PLCB4Q15147 1175 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 ATL3Q6DD88 541 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 MFSD5Q6N075 450 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 SERINC5Q86VE9 423 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 C4orf19Q8IY42 314 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 RPUSD2Q8IZ73 545 aaKnown RBP10.25□□□□□ -0.77
NUP54-207ENST00000508583 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
NUP54-207ENST00000508583 ZNF396Q96N95 335 aaPredicted RBP10.25□□□□□ -0.77
NUP54-207ENST00000508583 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 MTMR6Q9Y217 621 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 TELO2Q9Y4R8 837 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
NUP54-207ENST00000508583 MBLAC1A4D2B0 266 aaPredicted RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 TRIM43BA6NCK2 446 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 SLC26A4O43511 780 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 ZSCAN22P10073 491 aaPredicted RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 TECP42680 631 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 FPGSQ05932 587 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 SPIRE1Q08AE8 756 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 RESTQ13127 1097 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 KRT79Q5XKE5 535 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 FAM43BQ6ZT52 329 aaPredicted RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 RPAINQ86UA6 219 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 GJA10Q969M2 543 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 TRIM43Q96BQ3 446 aaPredicted RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 AK8Q96MA6 479 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 EIF2AK1Q9BQI3 630 aaKnown RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 LXNQ9BS40 222 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 NOC4LQ9BVI4 516 aaKnown RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 MTIF3Q9H2K0 278 aaKnown RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 TMEM60Q9H2L4 133 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 TUFT1Q9NNX1 390 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
NUP54-207ENST00000508583 PCDHA2Q9Y5H9 948 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
NUP54-207ENST00000508583 SMIM35A0A1B0GVV1 85 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 A0A1W2PPC1 479 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 WNT7AO00755 349 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 TREHO43280 583 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 LYPLA2O95372 231 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 CYP2C9P11712 490 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 CKBP12277 381 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 SELPP16109 830 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 RPA1P27694 616 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 YWHABP31946 246 aaKnown RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 BMP8BP34820 402 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 THPOP40225 353 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 DNM2P50570 870 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 IGBP1P78318 339 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 TBC1D8BQ0IIM8 1120 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 NBR1Q14596 966 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 IER5Q5VY09 327 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 LRRC8DQ7L1W4 858 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 NME8Q8N427 588 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 IGSF22Q8N9C0 903 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 SLC7A3Q8WY07 619 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 MAP7D2Q96T17 732 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 POLR3CQ9BUI4 534 aaPredicted RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 LRWD1Q9UFC0 647 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 MORC2Q9Y6X9 1032 aaPredicted RBP10.23□□□□□ -0.77
NUP54-207ENST00000508583 KDM3AQ9Y4C1 1321 aa10.23□□□□□ -0.77
NUP54-207ENST00000508583 POTEMA6NI47 508 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 DDX11L8A8MPP1 907 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 EML1O00423 815 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms