RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 Q4G0T1 1027 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 FBXO47Q5MNV8 452 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 MIS18BP1Q6P0N0 1132 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 MOXD1Q6UVY6 613 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 FAM43BQ6ZT52 329 aaPredicted RBP13.76□□□□□ -0.21
CLDND1-218ENST00000508503 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
CLDND1-218ENST00000508503 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 AIFM3Q96NN9 605 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 ZBED2Q9BTP6 218 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 INSL6Q9Y581 213 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 PRRC2BQ5JSZ5 2229 aaKnown RBP13.76□□□□□ -0.21
CLDND1-218ENST00000508503 MYH9P35579 1960 aaKnown RBP13.76□□□□□ -0.21
CLDND1-218ENST00000508503 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 SIP14410 1827 aa13.76□□□□□ -0.21
CLDND1-218ENST00000508503 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 COL1A2P08123 1366 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 EPOPA6NHQ4 379 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 ZBTB42B2RXF5 422 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
CLDND1-218ENST00000508503 CDKL5O76039 1030 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 AMHP03971 560 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 KLRC1P26715 233 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 ERVK-21P61565 698 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 IGBP1P78318 339 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 MRPS6P82932 125 aaKnown RBP13.75□□□□□ -0.21
CLDND1-218ENST00000508503 IER5Q5VY09 327 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 ZBTB10Q96DT7 871 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
CLDND1-218ENST00000508503 ZNF302Q9NR11 478 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
CLDND1-218ENST00000508503 LINC01553A4QN01 128 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 RFXAPO00287 272 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 ENPP3O14638 875 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 BACH1O14867 736 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 LPXNO60711 386 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 PSMD10O75832 226 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 PSAPP07602 524 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 FDPSP14324 419 aaKnown RBP13.74□□□□□ -0.21
CLDND1-218ENST00000508503 ME3Q16798 604 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 SPRED2Q7Z698 418 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 CRIPAKQ8N1N5 446 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
CLDND1-218ENST00000508503 UIMC1Q96RL1 719 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 AGO3Q9H9G7 860 aaKnown RBP13.74□□□□□ -0.21
CLDND1-218ENST00000508503 LMCD1Q9NZU5 365 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 CDY2AQ9Y6F7 541 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 TTC3P53804 2025 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 EVPLQ92817 2033 aa13.74□□□□□ -0.21
CLDND1-218ENST00000508503 WDR64B1ANS9 1081 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 DLL1O00548 723 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 GHRP10912 638 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 IGFBP4P22692 258 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 RTN4RL1Q86UN2 441 aaPredicted RBP13.73□□□□□ -0.21
CLDND1-218ENST00000508503 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
CLDND1-218ENST00000508503 CELF4Q9BZC1 486 aaKnown RBP13.73□□□□□ -0.21
CLDND1-218ENST00000508503 DISC1Q9NRI5 854 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 KCNJ14Q9UNX9 436 aa13.73□□□□□ -0.21
CLDND1-218ENST00000508503 LOXHD1Q8IVV2 1947 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 ZNF862O60290 1169 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 TDP2O95551 362 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 C22orf31O95567 290 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 SFNP31947 248 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 NEK4P51957 841 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 GRB10Q13322 594 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLDND1-218ENST00000508503 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 ARNTL2Q8WYA1 636 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 GTF3C6Q969F1 213 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
CLDND1-218ENST00000508503 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 SUGCTQ9HAC7 445 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
CLDND1-218ENST00000508503 GABBR1Q9UBS5 961 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 TRPV2Q9Y5S1 764 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
CLDND1-218ENST00000508503 GAS7O60861 476 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms