RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 UPP2O95045 317 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PRKACBP22694 351 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 WEE1P30291 646 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ATP1A2P50993 1020 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PLS1Q14651 629 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 INSCQ1MX18 579 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TMTC4Q5T4D3 741 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 FAM117BQ6P1L5 589 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 DHX32Q7L7V1 743 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 SLC51BQ86UW2 128 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 SPATA24Q86W54 205 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ARL6IP6Q8N6S5 226 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TNIP2Q8NFZ5 429 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ABTB1Q969K4 478 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ASIC4Q96FT7 647 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 METTL5Q9NRN9 209 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 FAM114A2Q9NRY5 505 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ATPIF1Q9UII2 106 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 MYH7P12883 1935 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 SH3PXD2BA1X283 911 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 M0QX08 132 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 PIK3CDO00329 1044 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 PDHA1P08559 390 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 NIPAL4Q0D2K0 466 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 QPCTQ16769 361 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF423Q2M1K9 1284 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 OTUD7BQ6GQQ9 843 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 BEND5Q7L4P6 421 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 TRPM8Q7Z2W7 1104 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 PEX13Q92968 403 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 LTV1Q96GA3 475 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 AIFM2Q9BRQ8 373 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 FAM129AQ9BZQ8 928 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 CNOT10Q9H9A5 744 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 ABCF3Q9NUQ8 709 aa11.68□□□□□ -0.54
PDLIM5-210ENST00000508216 A0A0B4J203 849 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 FKBP9O95302 570 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CTRB1P17538 263 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 UBASH3AP57075 661 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 NLRP12P59046 1061 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 PFKPQ01813 784 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 BNIP1Q12981 228 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 MYLK3Q32MK0 819 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 Q3C1V9 767 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 WASHC2DQ5SRD0 308 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 METTL21CQ5VZV1 264 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CTRB2Q6GPI1 263 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 FIP1L1Q6UN15 594 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 MARK2Q7KZI7 788 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 TAOK1Q7L7X3 1001 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 SLC35F6Q8N357 371 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC51Q96ER9 411 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 MOCS1Q9NZB8 636 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 ABCA6Q8N139 1617 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 ABCC4O15439 1325 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 FARP2O94887 1054 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 RARAP10276 462 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CDK4P11802 303 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CCNB1P14635 433 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 NAGAP17050 411 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CCNFP41002 786 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 TUFMP49411 452 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 DSTNP60981 165 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 GUCY2DQ02846 1103 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 AGBL2Q5U5Z8 902 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC174Q6PII3 467 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 DGLUCYQ7Z3D6 616 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 TRIML2Q8N7C3 387 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 TM6SF1Q9BZW5 370 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 HSD3B7Q9H2F3 369 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
PDLIM5-210ENST00000508216 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms