RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PARD6AQ9NPB6 346 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 NGRNQ9NPE2 291 aaKnown RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 SPATA6Q9NWH7 488 aaPredicted RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 GMEB2Q9UKD1 530 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 PNMA2Q9UL42 364 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 SMG5Q9UPR3 1016 aaKnown RBP8.46□□□□□ -1.06
VCAN-207ENST00000507162 HCFC2Q9Y5Z7 792 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 MYH7BA7E2Y1 1941 aa8.46□□□□□ -1.06
VCAN-207ENST00000507162 SPEGQ15772 3267 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 TSPY2A6NKD2 308 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 SPTLC1O15269 473 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 LAMTOR5O43504 91 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 CLASP2O75122 1294 aaKnown RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 LRRN2O75325 713 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 SLC3A2P08195 630 aaKnown RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 HOXD8P13378 290 aaPredicted RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 TGM1P22735 817 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 HOXC8P31273 242 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 FBXO47Q5MNV8 452 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 UTP14CQ5TAP6 766 aaKnown RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 KIAA1841Q6NSI8 718 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 GIMAP6Q6P9H5 292 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 BTNL9Q6UXG8 535 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 MAML2Q8IZL2 1156 aaPredicted RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 NETO1Q8TDF5 533 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
VCAN-207ENST00000507162 COL20A1Q9P218 1284 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 HCSTQ9UBK5 93 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 CDY2AQ9Y6F7 541 aa8.45□□□□□ -1.06
VCAN-207ENST00000507162 GREB1LQ9C091 1923 aaPredicted RBP8.44□□□□□ -1.06
VCAN-207ENST00000507162 C1QTNF9BB2RNN3 333 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 C1QTNF9P0C862 333 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 SP2Q02086 613 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 KRT17Q04695 432 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 MGAT3Q09327 533 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.06
VCAN-207ENST00000507162 LPAL2Q16609 132 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 FAM102BQ5T8I3 360 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 CLASRPQ8N2M8 674 aaKnown RBP8.44□□□□□ -1.06
VCAN-207ENST00000507162 MRPL43Q8N983 215 aaKnown RBP8.44□□□□□ -1.06
VCAN-207ENST00000507162 FEZF2Q8TBJ5 459 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 LMBR1Q8WVP7 490 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 DNAJB3Q8WWF6 145 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 BORCS6Q96GS4 357 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 GPR20Q99678 358 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 FTHL17Q9BXU8 183 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 BCAS3Q9H6U6 928 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 IL17RBQ9NRM6 502 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 DLGAP2Q9P1A6 1054 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 IGSF9Q9P2J2 1179 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 LZTS1Q9Y250 596 aa8.44□□□□□ -1.06
VCAN-207ENST00000507162 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
VCAN-207ENST00000507162 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 ATMINO43313 823 aaPredicted RBP8.43□□□□□ -1.06
VCAN-207ENST00000507162 RANBP6O60518 1105 aaKnown RBP8.43□□□□□ -1.06
VCAN-207ENST00000507162 CXCL14O95715 111 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 TRIM27P14373 513 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 GLULP15104 373 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 PMLP29590 882 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 SMC1AQ14683 1233 aaKnown RBP8.43□□□□□ -1.06
VCAN-207ENST00000507162 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 KCNV1Q6PIU1 500 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 CCDC149Q6ZUS6 474 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 TRIM50Q86XT4 487 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 SLC44A3Q8N4M1 653 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
VCAN-207ENST00000507162 EPB41L4AQ9HCS5 686 aaPredicted RBP8.43□□□□□ -1.06
VCAN-207ENST00000507162 ZSCAN32Q9NX65 697 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 PADI3Q9ULW8 664 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 PCDHGA2Q9Y5H1 932 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 BPTFQ12830 3046 aa8.43□□□□□ -1.06
VCAN-207ENST00000507162 FANCMQ8IYD8 2048 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 SDK1Q7Z5N4 2213 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 TBC1D4O60343 1298 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 GDF9O60383 454 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 HSPD1P10809 573 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 EPCAMP16422 314 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 LAG3P18627 525 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 UBA1P22314 1058 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 GBP2P32456 591 aaPredicted RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 PBX3P40426 434 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 ADAM17P78536 824 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 SHC2P98077 582 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 SP4Q02446 784 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 RING1Q06587 406 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 TMEM62Q0P6H9 643 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms