RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 MMP1P03956 469 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 ITGB1P05556 798 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 GSPT1P15170 499 aaKnown RBP9.44□□□□□ -0.9
SNF8-204ENST00000506104 KCNA2P16389 499 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 ITGB5P18084 799 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 CHMLP26374 656 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 ANTXR2P58335 489 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 IRX6P78412 446 aaPredicted RBP9.44□□□□□ -0.9
SNF8-204ENST00000506104 ADAM17P78536 824 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 MGAT3Q09327 533 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 AAMPQ13685 434 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 LLGL2Q6P1M3 1020 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 XRRA1Q6P2D8 792 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 NPAS4Q8IUM7 802 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 THNSL1Q8IYQ7 743 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 CMTR2Q8IYT2 770 aaKnown RBP9.44□□□□□ -0.9
SNF8-204ENST00000506104 POF1BQ8WVV4 589 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 SPZ1Q9BXG8 430 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 JPH1Q9HDC5 661 aaPredicted RBP9.44□□□□□ -0.9
SNF8-204ENST00000506104 SLC9A2Q9UBY0 812 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 TCEAL9Q9UHQ7 104 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 PADI3Q9ULW8 664 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 PCDHB7Q9Y5E2 793 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 PCDHB12Q9Y5F1 795 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
SNF8-204ENST00000506104 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 TMEM221A6NGB7 291 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 RRN3P2A6NIE6 340 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 M0R296 226 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 DNAJB1P25685 340 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 PDE4AP27815 886 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 STAT5BP51692 787 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 NAPAP54920 295 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 KRT76Q01546 638 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 ADAM15Q13444 863 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 PLCB4Q15147 1175 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 MB21D2Q8IYB1 491 aaPredicted RBP9.43□□□□□ -0.9
SNF8-204ENST00000506104 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
SNF8-204ENST00000506104 RNF169Q8NCN4 708 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 SPPL3Q8TCT6 385 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 LINC01599Q8WXQ3 324 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 TNPO1Q92973 898 aaKnown RBP9.43□□□□□ -0.9
SNF8-204ENST00000506104 PHOX2BQ99453 314 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 LZTS2Q9BRK4 669 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 CELF4Q9BZC1 486 aaKnown RBP9.43□□□□□ -0.9
SNF8-204ENST00000506104 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 TSHZ2Q9NRE2 1034 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 AAASQ9NRG9 546 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
SNF8-204ENST00000506104 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 RPS6KA5O75582 802 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 CALM1P0DP23 149 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 CALM2P0DP24 149 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 CALM3P0DP25 149 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 MCM5P33992 734 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 ACTR2P61160 394 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
SNF8-204ENST00000506104 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 MARCH8Q5T0T0 291 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 PLPP4Q5VZY2 271 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 RTN4RL1Q86UN2 441 aaPredicted RBP9.42□□□□□ -0.9
SNF8-204ENST00000506104 EDAQ92838 391 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
SNF8-204ENST00000506104 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
SNF8-204ENST00000506104 JADE2Q9NQC1 790 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 FAM86C1Q9NVL1 165 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
SNF8-204ENST00000506104 UBIAD1Q9Y5Z9 338 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
SNF8-204ENST00000506104 MBLAC1A4D2B0 266 aaPredicted RBP9.41□□□□□ -0.9
SNF8-204ENST00000506104 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
SNF8-204ENST00000506104 SRGAP2BP0DMP2 458 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 ARP10275 920 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 KLRC1P26715 233 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 TECP42680 631 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 ADCY7P51828 1080 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 HERC4Q5GLZ8 1057 aaPredicted RBP9.41□□□□□ -0.9
SNF8-204ENST00000506104 FAM102BQ5T8I3 360 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 IER5LQ5T953 404 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 MTHFD1LQ6UB35 978 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 METTL13Q8N6R0 699 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 EFHBQ8N7U6 833 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 TMEM87AQ8NBN3 555 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 CYP2W1Q8TAV3 490 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 P2RX5Q93086 422 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 SCLT1Q96NL6 688 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 PCYT2Q99447 389 aa9.41□□□□□ -0.9
SNF8-204ENST00000506104 ADAM2Q99965 735 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms