RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 SESN3P58005 492 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 CUL3Q13618 768 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 SLC29A2Q14542 456 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 TMEM237Q96Q45 408 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 CNNM1Q9NRU3 951 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 LRRC42Q9Y546 428 aa15.41■□□□□ 0.06
COL6A4P2-202ENST00000504443 SCN11AQ9UI33 1791 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 TTC36A6NLP5 189 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 PLTPP55058 493 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 TROAPQ12815 778 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 RAPGEF1Q13905 1077 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 LRRC23Q53EV4 343 aaPredicted RBP15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 FOXB2Q5VYV0 432 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 FAM133AQ8N9E0 248 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 GDAP1Q8TB36 358 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 TMEM165Q9HC07 324 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 PGRMC1O00264 195 aaKnown RBP15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 PLCG1P19174 1290 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 CCNG1P51959 295 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 SEPT2Q15019 361 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 ASRGL1Q7L266 308 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 HOOK3Q86VS8 718 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 FBF1Q8TES7 1133 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 GLG1Q92896 1179 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 TRIM9Q9C026 710 aa15.4■□□□□ 0.06
COL6A4P2-202ENST00000504443 CNTNAP5Q8WYK1 1306 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 GOLGA6L10A0A0M3HER8 536 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 NMT2O60551 498 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 NPTXRO95502 500 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 CABP4P57796 275 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 EVX2Q03828 476 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 IFIT1BQ5T764 474 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 ANKRD42Q8N9B4 389 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 TTC8Q8TAM2 541 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 IFT74Q96LB3 600 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 ZMYND12Q9H0C1 365 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 NSRP1Q9H0G5 558 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 CNGA1P29973 690 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 PEX5P50542 639 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 PDE6CP51160 858 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 ZNF131P52739 623 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 MRPS35P82673 323 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 RASGRF1Q13972 1273 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 LRRC41Q15345 812 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 CNGA2Q16280 664 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 FAM83BQ5T0W9 1011 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 ATP8B4Q8TF62 1192 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 GPKOWQ92917 476 aaPredicted RBP eCLIP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 BIN2Q9UBW5 565 aaPredicted RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 SNX24Q9Y343 169 aa15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 RTCBQ9Y3I0 505 aaKnown RBP15.39■□□□□ 0.05
COL6A4P2-202ENST00000504443 SSU72P8A0A1W2PR75 194 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 SUN1O94901 812 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 ATP6V1C1P21283 382 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 PMS2P54278 862 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 KLC1Q07866 573 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 ADCY1Q08828 1119 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 PRPF4BQ13523 1007 aaKnown RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 ARL6IP4Q66PJ3 421 aaKnown RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 DENND2CQ68D51 928 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 MIGA2Q7L4E1 593 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 GLIS3Q8NEA6 775 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 ZSCAN10Q96SZ4 725 aaPredicted RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 SEMA4AQ9H3S1 761 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 MEGF6O75095 1541 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 PEX11AO75192 247 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 CALB2P22676 271 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 GBP1P32455 592 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 RCAN1P53805 252 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 MGAT5Q09328 741 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 MAN2A1Q16706 1144 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 SYCP3Q8IZU3 236 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 KIFAP3Q92845 792 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 NUDCD1Q96RS6 583 aa15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
COL6A4P2-202ENST00000504443 RNPEPL1Q9HAU8 725 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms