RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CACNB3P54284 484 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ERICH1Q86X53 443 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 STAG1Q8WVM7 1258 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MMP19Q99542 508 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MED4Q9NPJ6 270 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CDC23Q9UJX2 597 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CHD1O14646 1710 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 RPS6KA4O75676 772 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SUN1O94901 812 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CYP2D6P10635 497 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MCAMP43121 646 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 HLFQ16534 295 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MTRQ99707 1265 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 POLIQ9UNA4 740 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ATP8A1Q9Y2Q0 1164 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ZNF335Q9H4Z2 1342 aaPredicted RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PTCH1Q13635 1447 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 DENND3A2RUS2 1198 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 K7ERI5 159 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 EVI5O60447 810 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MGEA5O60502 916 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 HIP1RO75146 1068 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 MT-ND3P03897 115 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CCNE1P24864 410 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 GPC3P51654 580 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ETF1P62495 437 aaKnown RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 HP1BP3Q5SSJ5 553 aaPredicted RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 NDUFAF2Q8N183 169 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 FAM167AQ96KS9 214 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SAMSN1Q9NSI8 373 aaKnown RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 NRBP1Q9UHY1 535 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PYCARDQ9ULZ3 195 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 IFNAR1P17181 557 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 HOXC10Q9NYD6 342 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 HACD3Q9P035 362 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 INPP5FQ9Y2H2 1132 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SMIM24O75264 130 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ZBED1O96006 694 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 STMN1P16949 149 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CXCR5P32302 372 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PPARGP37231 505 aaPredicted RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ZSCAN26Q16670 478 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SRRM1Q8IYB3 904 aaKnown RBP7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 TTLL11Q8NHH1 800 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 CHAMP1Q96JM3 812 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 ZNF302Q9NR11 478 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 EPS15L1Q9UBC2 864 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 SCINQ9Y6U3 715 aa7.73□□□□□ -1.17
SYNPO2-205ENST00000504178 PHLPP2Q6ZVD8 1323 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 SASH1O94885 1247 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 SEC31AO94979 1220 aaKnown RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 PMLP29590 882 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 IFNAR2P48551 515 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 RNF219Q5W0B1 726 aaPredicted RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 SNRNP48Q6IEG0 339 aaKnown RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 CCDC197Q8NCU1 140 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 CDC26Q8NHZ8 85 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 SPTLC3Q9NUV7 552 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ZBTB5O15062 677 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ASNSP08243 561 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 PAMP19021 973 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 PHKA2P46019 1235 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 YWHAHQ04917 246 aaPredicted RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 LRRC63Q05C16 580 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 RESTQ13127 1097 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 TBC1D9BQ66K14 1250 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 APOBEC3FQ8IUX4 373 aaKnown RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 MB21D1Q8N884 522 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 PIGOQ8TEQ8 1089 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 EXT2Q93063 718 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 FAF2Q96CS3 445 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 WRNIP1Q96S55 665 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ZHX2Q9Y6X8 837 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 KDM6BO15054 1643 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ADCY10Q96PN6 1610 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 DR1Q01658 176 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 KLC3Q6P597 504 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ZMYND10O75800 440 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 NSUN2Q08J23 767 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 LLGL1Q15334 1064 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 ZNF667Q5HYK9 610 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 CLEC4GQ6UXB4 293 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 THNSL1Q8IYQ7 743 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 RAD54LQ92698 747 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 FBXO40Q9UH90 709 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 TBK1Q9UHD2 729 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 TET3O43151 1660 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 TSPY1Q01534 308 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 C1orf228Q6PIY5 440 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 FRA10AC1Q70Z53 315 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 BCAS4Q8TDM0 211 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 MMTAG2Q9BU76 263 aaKnown RBP7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 GINM1Q9NU53 330 aa7.72□□□□□ -1.17
SYNPO2-205ENST00000504178 A0A087WWV3 80 aa7.71□□□□□ -1.17
SYNPO2-205ENST00000504178 H7C1W4 665 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms