RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 NMT2O60551 498 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 GJB5O95377 273 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 BMP3P12645 472 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ALAS2P22557 587 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 MCCP23508 829 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 CTNNB1P35222 781 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 SLC16A2P36021 539 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 RFC5P40937 340 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 TDO2P48775 406 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 STAT2P52630 851 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ERVK-21P61565 698 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ZNF200P98182 395 aaPredicted RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 GPM6BQ13491 265 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 BFSP2Q13515 415 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 BAATQ14032 418 aaPredicted RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 MBTPS1Q14703 1052 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 TIGD5Q53EQ6 642 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 TTBK2Q6IQ55 1244 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 CEP85Q6P2H3 762 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 CNKSR3Q6P9H4 555 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ASCL5Q7RTU5 278 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 NLRP8Q86W28 1048 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 SUGP1Q8IWZ8 645 aaKnown RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 FTSJ3Q8IY81 847 aaKnown RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 PRPF38AQ8NAV1 312 aaKnown RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 BANK1Q8NDB2 785 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 CHST13Q8NET6 341 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 AFG1LQ8WV93 481 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 YME1L1Q96TA2 773 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 OSBPL7Q9BZF2 842 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 IGFLR1Q9H665 355 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 VTA1Q9NP79 307 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 INCENPQ9NQS7 918 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ATP8A2Q9NTI2 1148 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 CYP39A1Q9NYL5 469 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 ARPP21Q9UBL0 812 aaPredicted RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 FBXO40Q9UH90 709 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 USP34Q70CQ2 3546 aa4.31□□□□□ -1.72
USP46-205ENST00000504078 TRIP12Q14669 1992 aaPredicted RBP4.31□□□□□ -1.72
USP46-205ENST00000504078 ZNF318Q5VUA4 2279 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 IGKV6D-41A0A0C4DH26 115 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 H0Y858 1186 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 STXBP3O00186 592 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ATP2A1O14983 1001 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 MBTPS2O43462 519 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 LGR5O75473 907 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 IL2RAP01589 272 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 MMP3P08254 477 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 IFIT2P09913 472 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 TSPY3P0CV98 308 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 TSPY8P0CW00 308 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 CKBP12277 381 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 SELPP16109 830 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 RFC2P35250 354 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 SLC1A4P43007 532 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 CPT1AP50416 773 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 NKX3-2P78367 333 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 RBM10P98175 930 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 ATP8B2P98198 1209 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 PDE4BQ07343 736 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 HYAL1Q12794 435 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 TTF1Q15361 905 aaPredicted RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 USH1GQ495M9 461 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 DUSP28Q4G0W2 176 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 TMEM259Q4ZIN3 620 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 EPC2Q52LR7 807 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 C4orf17Q53FE4 359 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ZNF618Q5T7W0 954 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ADGRD2Q7Z7M1 963 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ADHFE1Q8IWW8 467 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 PHOSPHO2Q8TCD6 241 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 RHPN1Q8TCX5 695 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 NEK9Q8TD19 979 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 PANK1Q8TE04 598 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 RHBDD1Q8TEB9 315 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ATOH1Q92858 354 aaPredicted RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 PBXIP1Q96AQ6 731 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 MRPL38Q96DV4 380 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 RAD9AQ99638 391 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 ZCCHC2Q9C0B9 1178 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 CPVLQ9H3G5 476 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 SMOC2Q9H3U7 446 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 NSUN3Q9H649 340 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 TLR9Q9NR96 1032 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 NYAP2Q9P242 653 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 HDAC6Q9UBN7 1215 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 FEM1BQ9UK73 627 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 PRR12Q9ULL5 1215 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 BARX2Q9UMQ3 279 aaPredicted RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 NOP58Q9Y2X3 529 aaKnown RBP4.3□□□□□ -1.72
USP46-205ENST00000504078 HRH3Q9Y5N1 445 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 BRWD1Q9NSI6 2320 aa4.3□□□□□ -1.72
USP46-205ENST00000504078 RALGAPA2Q2PPJ7 1873 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms