RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 RIC8BQ9NVN3 520 aa6.11□□□□□ -1.43
SUB1-204ENST00000504016 ARHGAP28Q9P2N2 729 aa6.11□□□□□ -1.43
SUB1-204ENST00000504016 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 TCRBV5S4A2TA0A5A2 114 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 CUTAO60888 179 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 ARHGAP36Q6ZRI8 547 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 LRP10Q7Z4F1 713 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
SUB1-204ENST00000504016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.09□□□□□ -1.43
SUB1-204ENST00000504016 AQP7O14520 342 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 PTPN1P18031 435 aaKnown RBP6.09□□□□□ -1.43
SUB1-204ENST00000504016 RRADP55042 308 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 WDR72Q3MJ13 1102 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 SCUBE1Q8IWY4 988 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
SUB1-204ENST00000504016 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 SRPK3Q9UPE1 567 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 PTCH2Q9Y6C5 1203 aa6.09□□□□□ -1.43
SUB1-204ENST00000504016 FAM90A27PA6NNH2 459 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 COMTP21964 271 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
SUB1-204ENST00000504016 GPR19Q15760 415 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 NRN1LQ496H8 165 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 ZMAT1Q5H9K5 638 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 MAMDC2Q7Z304 686 aaPredicted RBP6.08□□□□□ -1.44
SUB1-204ENST00000504016 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 SH3TC2Q8TF17 1288 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 FBXW5Q969U6 566 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 PCED1AQ9H1Q7 454 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 PCDHA8Q9Y5H6 950 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 ATP23Q9Y6H3 246 aa6.08□□□□□ -1.44
SUB1-204ENST00000504016 KRT15P19012 456 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 CR2P20023 1033 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 ST5P78524 1137 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 FOXE3Q13461 319 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 NOLC1Q14978 699 aaKnown RBP eCLIP6.07□□□□□ -1.443e-10■■■□□ 17.6
SUB1-204ENST00000504016 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 AGBL4Q5VU57 503 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 OSTM1Q86WC4 334 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 PTRH1Q86Y79 214 aaKnown RBP6.07□□□□□ -1.44
SUB1-204ENST00000504016 THAP3Q8WTV1 239 aaPredicted RBP6.07□□□□□ -1.44
SUB1-204ENST00000504016 PTPRN2Q92932 1015 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 MRPS23Q9Y3D9 190 aaKnown RBP6.07□□□□□ -1.44
SUB1-204ENST00000504016 NR2E1Q9Y466 385 aa6.07□□□□□ -1.44
SUB1-204ENST00000504016 NPIPB8E9PQR5 432 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 CDC14BO60729 498 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 SRGAP2CP0DJJ0 459 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 PYGMP11217 842 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 PDE6AP16499 860 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 GJA4P35212 333 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 KLF10Q13118 480 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 USP39Q53GS9 565 aaKnown RBP6.06□□□□□ -1.44
SUB1-204ENST00000504016 C2orf27AQ580R0 203 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 RNF207Q6ZRF8 634 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 EDAQ92838 391 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 MENTQ9BUN1 341 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 C12orf65Q9H3J6 166 aaKnown RBP6.06□□□□□ -1.44
SUB1-204ENST00000504016 OAZ3Q9UMX2 235 aa6.06□□□□□ -1.44
SUB1-204ENST00000504016 MRPL42Q9Y6G3 142 aaKnown RBP6.06□□□□□ -1.44
SUB1-204ENST00000504016 MAN2B1O00754 1011 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 WNT9AO14904 365 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 GSTA4O15217 222 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 RAD17O75943 681 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 HMGCRP04035 888 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 AMY2AP04746 511 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 NAT1P18440 290 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 AMY2BP19961 511 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
SUB1-204ENST00000504016 PTGS1P23219 599 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 ETV4P43268 484 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 KCNQ1P51787 676 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
SUB1-204ENST00000504016 CRY1Q16526 586 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 FIGNQ5HY92 759 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 C16orf59Q7L2K0 433 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 POLNQ7Z5Q5 900 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 PCDH19Q8TAB3 1148 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 WDR48Q8TAF3 677 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
SUB1-204ENST00000504016 OR14A2Q96R54 314 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 DPYSL5Q9BPU6 564 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 ZDHHC5Q9C0B5 715 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 CSRNP2Q9H175 543 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 SLITRK6Q9H5Y7 841 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 INCENPQ9NQS7 918 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 GALNT8Q9NY28 637 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
SUB1-204ENST00000504016 PRAMEF25A6NGN4 478 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 OVOL3O00110 214 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 PPP1R12AO14974 1030 aaPredicted RBP6.04□□□□□ -1.44
SUB1-204ENST00000504016 ADCY8P40145 1251 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 JAM2P57087 298 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 IL13RA1P78552 427 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 MIIPQ5JXC2 388 aa6.04□□□□□ -1.44
SUB1-204ENST00000504016 CXXC5Q7LFL8 322 aaKnown RBP6.04□□□□□ -1.44
SUB1-204ENST00000504016 JAZF1Q86VZ6 243 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms