RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 USP17L6PQ6QN14 398 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 VN1R2Q8NFZ6 395 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 SMARCC2Q8TAQ2 1214 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 SUSD6Q92537 303 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 GLG1Q92896 1179 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 TLR9Q9NR96 1032 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 PADI3Q9ULW8 664 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
DDR1-250ENST00000503628 PLXNA3P51805 1871 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 SCG2P13521 617 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 KCNA2P16389 499 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 IBSPP21815 317 aaPredicted RBP18.12■□□□□ 0.49
DDR1-250ENST00000503628 TMEM62Q0P6H9 643 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 PTPN21Q16825 1174 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 LSG1Q9H089 658 aaKnown RBP18.12■□□□□ 0.49
DDR1-250ENST00000503628 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 LRFN2Q9ULH4 789 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
DDR1-250ENST00000503628 PDGFBP01127 241 aaPredicted RBP18.11■□□□□ 0.49
DDR1-250ENST00000503628 INSRRP14616 1297 aa18.11■□□□□ 0.49
DDR1-250ENST00000503628 SMARCAD1Q9H4L7 1026 aa18.11■□□□□ 0.49
DDR1-250ENST00000503628 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
DDR1-250ENST00000503628 PCDHB12Q9Y5F1 795 aa18.11■□□□□ 0.49
DDR1-250ENST00000503628 TRPV2Q9Y5S1 764 aa18.11■□□□□ 0.49
DDR1-250ENST00000503628 MYO10Q9HD67 2058 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 FNDC1Q4ZHG4 1894 aaPredicted RBP18.1■□□□□ 0.49
DDR1-250ENST00000503628 RRN3P2A6NIE6 340 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 MEIS2O14770 477 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
DDR1-250ENST00000503628 ERVFC1P60507 584 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 FOXK2Q01167 660 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 TROAPQ12815 778 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 PAK2Q13177 524 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 DUSP6Q16828 381 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
DDR1-250ENST00000503628 CUL5Q93034 780 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 GPRASP2Q96D09 838 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 NEK1Q96PY6 1258 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 S1PR5Q9H228 398 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 TMX1Q9H3N1 280 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 PKD2L1Q9P0L9 805 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
DDR1-250ENST00000503628 RBM8AQ9Y5S9 174 aaKnown RBP18.1■□□□□ 0.49
DDR1-250ENST00000503628 IGSF9BQ9UPX0 1349 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 M0QZ92 97 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 PIK3CDO00329 1044 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 RPLP2P05387 115 aaKnown RBP18.09■□□□□ 0.49
DDR1-250ENST00000503628 ITGB5P18084 799 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 UBE3AQ05086 875 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 ZBTB33Q86T24 672 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 CDHR1Q96JP9 859 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 RIPOR3Q96MK2 946 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 CDCA3Q99618 268 aaPredicted RBP18.09■□□□□ 0.49
DDR1-250ENST00000503628 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
DDR1-250ENST00000503628 MYO15AQ9UKN7 3530 aa18.09■□□□□ 0.49
DDR1-250ENST00000503628 FGF18O76093 207 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 CYP21A2P08686 494 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.48
DDR1-250ENST00000503628 SARSP49591 514 aaKnown RBP18.08■□□□□ 0.48
DDR1-250ENST00000503628 TRDNQ13061 729 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 TMEM266Q2M3C6 531 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 ASCL5Q7RTU5 278 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 PCYT2Q99447 389 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 AAASQ9NRG9 546 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 TMEM260Q9NX78 707 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 PCDHA2Q9Y5H9 948 aa18.08■□□□□ 0.48
DDR1-250ENST00000503628 RIF1Q5UIP0 2472 aaKnown RBP18.07■□□□□ 0.48
DDR1-250ENST00000503628 VPS13AQ96RL7 3174 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 TBKBP1A7MCY6 615 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 PROB1E7EW31 1015 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 GALR2O43603 387 aaPredicted RBP18.07■□□□□ 0.48
DDR1-250ENST00000503628 TECP42680 631 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 NUBP1P53384 320 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 NFX1Q12986 1120 aaKnown RBP18.07■□□□□ 0.48
DDR1-250ENST00000503628 WTAPQ15007 396 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 FAM102BQ5T8I3 360 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 ANKRD54Q6NXT1 300 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 SYCE2Q6PIF2 218 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 TMEM184AQ6ZMB5 413 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 HCSTQ9UBK5 93 aa18.07■□□□□ 0.48
DDR1-250ENST00000503628 ERICH2A1L162 156 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 FSCN2O14926 492 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 MGEA5O60502 916 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 KRT76Q01546 638 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 MTMR1Q13613 665 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 KCNC3Q14003 757 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 PDE12Q6L8Q7 609 aaKnown RBP18.06■□□□□ 0.48
DDR1-250ENST00000503628 THNSL1Q8IYQ7 743 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 KREMEN2Q8NCW0 462 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 TYW1Q9NV66 732 aaKnown RBP18.06■□□□□ 0.48
DDR1-250ENST00000503628 TRPC6Q9Y210 931 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 UBIAD1Q9Y5Z9 338 aa18.06■□□□□ 0.48
DDR1-250ENST00000503628 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
DDR1-250ENST00000503628 APOBRQ0VD83 1088 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms