RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CASP8AP2	Q9UKL3	1982 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	IGSF9B	Q9UPX0	1349 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	STBD1	O95210	358 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	EYA4	O95677	639 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	TXN	P10599	105 aa	Known RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	CASP1	P29466	404 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	ADCYAP1R1	P41586	468 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	AFM	P43652	599 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	QARS	P47897	775 aa	Known RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	ARHGAP1	Q07960	439 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	DSG2	Q14126	1118 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	KIF22	Q14807	665 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	C4orf19	Q8IY42	314 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	SYT2	Q8N9I0	419 aa	Predicted RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	BANK1	Q8NDB2	785 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	CD99L2	Q8TCZ2	262 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	STAM	Q92783	540 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	COPS5	Q92905	334 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	CCDC34	Q96HJ3	373 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	PCYT2	Q99447	389 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	TRIM9	Q9C026	710 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	ZSWIM4	Q9H7M6	989 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	SRRD	Q9UH36	339 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	TCEAL9	Q9UHQ7	104 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	NRBP1	Q9UHY1	535 aa		13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	HOOK1	Q9UJC3	728 aa	Known RBP	13.58	□□□□□ -0.24
MATR3-231	ENST00000502394	MYMK	A6NI61	221 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	NKRF	O15226	690 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	ADCY6	O43306	1168 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	KLRC4	O43908	158 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	ZNF862	O60290	1169 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	FKTN	O75072	461 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	LGR5	O75473	907 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	GNRH1	P01148	92 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	PSAP	P07602	524 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	PLA2G4B	P0C869	781 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	HOXD8	P13378	290 aa	Predicted RBP	13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	CYP2C19	P33261	490 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	PSMC5	P62195	406 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	MAP2K1	Q02750	393 aa	Predicted RBP	13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	CUL4B	Q13620	913 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	DUSP28	Q4G0W2	176 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	IQSEC1	Q6DN90	963 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	MIS18BP1	Q6P0N0	1132 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	SV2B	Q7L1I2	683 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	GAS2L3	Q86XJ1	694 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	TPH2	Q8IWU9	490 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	DNAJC5G	Q8N7S2	189 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	TRIB2	Q92519	343 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	NACC1	Q96RE7	527 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	GPR20	Q99678	358 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	DNM3	Q9UQ16	869 aa		13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.57	□□□□□ -0.24
MATR3-231	ENST00000502394	WDR81	Q562E7	1941 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394		A0A087WWV3	80 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	ZBTB39	O15060	712 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	GH1	P01241	217 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	XRCC6	P12956	609 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	9e-7	■□□□□ 8.5
MATR3-231	ENST00000502394	CYBA	P13498	195 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	SMPD1	P17405	629 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	CYP11B2	P19099	503 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	ATP4A	P20648	1035 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	PTGS1	P23219	599 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	TYRO3	Q06418	890 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	CCDC144B	Q3MJ40	725 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	HSDL1	Q3SXM5	330 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	PRAMEF19	Q5SWL8	479 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	GJC2	Q5T442	439 aa	Predicted RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	DHX37	Q8IY37	1157 aa	Known RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	TRMT44	Q8IYL2	757 aa	Known RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	TRPV1	Q8NER1	839 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	AFAP1L1	Q8TED9	768 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	SEPT1	Q8WYJ6	367 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	DNAJC19	Q96DA6	116 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	ERO1A	Q96HE7	468 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	GSDMA	Q96QA5	445 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	BLZF1	Q9H2G9	400 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	MLXIP	Q9HAP2	919 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	WBP1L	Q9NX94	342 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	GABBR1	Q9UBS5	961 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	DBR1	Q9UK59	544 aa	Known RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	MAN1B1	Q9UKM7	699 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	GNE	Q9Y223	722 aa	Known RBP	13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	SAMM50	Q9Y512	469 aa		13.56	□□□□□ -0.24
MATR3-231	ENST00000502394	SORBS3	O60504	671 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	CCDC192	P0DO97	292 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	BMP6	P22004	513 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	HOXD10	P28358	340 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	AMPD3	Q01432	767 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	SP4	Q02446	784 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	EHHADH	Q08426	723 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	LAMC2	Q13753	1193 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	MORC3	Q14149	939 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	KCNB1	Q14721	858 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	ARSH	Q5FYA8	562 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	SWSAP1	Q6NVH7	229 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms