RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PCDHGA7Q9Y5G6 932 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA6Q9Y5G7 932 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA3Q9Y5H0 932 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCDHGA2Q9Y5H1 932 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPP2R3BQ9Y5P8 575 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 KIF7Q2M1P5 1343 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 AKAP12Q02952 1782 aa3.09□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZFYVE26Q68DK2 2539 aa3.09□□□□□ -1.92
CKS1BP2-201ENST00000497342 TEP1Q99973 2627 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 RIF1Q5UIP0 2472 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF891A8MT65 544 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 AURKAO14965 403 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TBX3O15119 743 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 MAFGO15525 162 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SIGLEC6O43699 453 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 LILRB5O75023 590 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TCEA3O75764 348 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 MMP10P09238 476 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 PF4V1P10720 104 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 CD53P19397 219 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ITIH2P19823 946 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ALAS2P22557 587 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ETV3P41162 512 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ALDH5A1P51649 535 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SOX4Q06945 474 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 MMRN1Q13201 1228 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 KCNAB2Q13303 367 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 LRRC32Q14392 662 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 GRM3Q14832 879 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 PTPN21Q16825 1174 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ATP13A4Q4VNC1 1196 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TMEM177Q53S58 311 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 RRP12Q5JTH9 1297 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ATAT1Q5SQI0 421 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 C10orf62Q5T681 223 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 IQCEQ6IPM2 695 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SEZ6L2Q6UXD5 910 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 C16orf59Q7L2K0 433 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ARMCX6Q7L4S7 300 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 UBE3DQ7Z6J8 389 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 MORC1Q86VD1 984 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 RASSF3Q86WH2 238 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 AMIGO3Q86WK7 504 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 WFDC8Q8IUA0 241 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TPH2Q8IWU9 490 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 STK11IPQ8N1F8 1099 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TMEM130Q8N3G9 435 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ENAHQ8N8S7 591 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLC35G2Q8TBE7 412 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 LMBR1Q8WVP7 490 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 EZH1Q92800 747 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 HSPBAP1Q96EW2 488 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 AHCYL2Q96HN2 611 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TAAR9Q96RI9 348 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 MMP19Q99542 508 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 HERPUD2Q9BSE4 406 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SELENOOQ9BVL4 669 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 LGR4Q9BXB1 951 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ACSS3Q9H6R3 686 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 KCNK4Q9NYG8 393 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SWAP70Q9UH65 585 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ADGRE2Q9UHX3 823 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 CCNL1Q9UK58 526 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 SF3B6Q9Y3B4 125 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 ANKRD17O75179 2603 aaKnown RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 COL5A2P05997 1499 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 LMO7Q8WWI1 1683 aa3.08□□□□□ -1.92
CKS1BP2-201ENST00000497342 TRPM3Q9HCF6 1732 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 USP24Q9UPU5 2620 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 RBBP6Q7Z6E9 1792 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ADAMTSL1Q8N6G6 1762 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PAPPA2Q9BXP8 1791 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KAT6BQ8WYB5 2073 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ABHD14A-ACY1A0A1B0GW23 586 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM86C2PA6NEL3 165 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 NEURL1BA8MQ27 555 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 NRDCO43847 1150 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GAS7O60861 476 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SNUPNO95149 360 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KCNH1O95259 989 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GSNP06396 782 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SNRPB2P08579 225 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 IFIT2P09913 472 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZBTB48P10074 688 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SRFP11831 508 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLC5A1P13866 664 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 HOXB4P17483 251 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 RHCEP18577 417 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 BDNFP23560 247 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SERPINB3P29508 390 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 MAN1A1P33908 653 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 LTBRP36941 435 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GRIK1P39086 918 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 IARSP41252 1262 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GPR3P46089 330 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ADKP55263 362 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMAD3P84022 425 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 AMPD2Q01433 879 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GUCY1A3Q02108 690 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms