RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 MGAT3Q09327 533 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 LPIN1Q14693 890 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 SYCE2Q6PIF2 218 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 SKAP1Q86WV1 359 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 NKD2Q969F2 451 aaPredicted RBP11.33□□□□□ -0.6
SRSF4-205ENST00000497015 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 MYH7BA7E2Y1 1941 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 FAM186AA6NE01 2351 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 B4E1Z4 1266 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 E7EWF7 191 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 CAND2O75155 1236 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 LGALS2P05162 132 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 UBA1P22314 1058 aaKnown RBP11.32□□□□□ -0.6
SRSF4-205ENST00000497015 ERVFC1P60507 584 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
SRSF4-205ENST00000497015 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
SRSF4-205ENST00000497015 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 CNTNAP3BQ96NU0 1288 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
SRSF4-205ENST00000497015 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 CNTNAP3Q9BZ76 1288 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 TLE6Q9H808 572 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
SRSF4-205ENST00000497015 PNMA2Q9UL42 364 aa11.32□□□□□ -0.6
SRSF4-205ENST00000497015 ERICH2A1L162 156 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 HSD17B4P51659 736 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
SRSF4-205ENST00000497015 KRT32Q14532 448 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 CDC37Q16543 378 aaPredicted RBP11.31□□□□□ -0.6
SRSF4-205ENST00000497015 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
SRSF4-205ENST00000497015 TMEM184AQ6ZMB5 413 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 STOX1Q6ZVD7 989 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 MAF1Q9H063 256 aa11.31□□□□□ -0.6
SRSF4-205ENST00000497015 KMT2BQ9UMN6 2715 aaPredicted RBP11.31□□□□□ -0.6
SRSF4-205ENST00000497015 TTC3P53804 2025 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-205ENST00000497015 NPR3P17342 541 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 SEC23AQ15436 765 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 DUSP6Q16828 381 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 PAN2Q504Q3 1202 aaKnown RBP11.3□□□□□ -0.6
SRSF4-205ENST00000497015 CREB3L3Q68CJ9 461 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-205ENST00000497015 TRIM50Q86XT4 487 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 TMTC2Q8N394 836 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-205ENST00000497015 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 KCNB2Q92953 911 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 KAT14Q9H8E8 782 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 JMJD4Q9H9V9 463 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 ABCB11O95342 1321 aa11.3□□□□□ -0.6
SRSF4-205ENST00000497015 GVINP1Q7Z2Y8 2422 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 FRYLO94915 3013 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 ZNF292O60281 2723 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 FSCN2O14926 492 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 SLC27A2O14975 620 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 CFBP00751 764 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MCM5P33992 734 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 GHRHRQ02643 423 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 DSG2Q14126 1118 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 PGM5Q15124 567 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 FBXO47Q5MNV8 452 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 CWF19L1Q69YN2 538 aaKnown RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MCF2L2Q86YR7 1114 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 CMTR2Q8IYT2 770 aaKnown RBP11.29□□□□□ -0.6
SRSF4-205ENST00000497015 ZBTB10Q96DT7 871 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 GPR20Q99678 358 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 ZKSCAN3Q9BRR0 538 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
SRSF4-205ENST00000497015 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 ASGR2P07307 311 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 TGFB3P10600 412 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
SRSF4-205ENST00000497015 CD52P31358 61 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 LIFRP42702 1097 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms