RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 KIF28PB7ZC32 967 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 WNT7AO00755 349 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 RSPH10BP0C881 870 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 U2AF2P26368 475 aaKnown RBP eCLIP25.59■■□□□ 1.692e-18■□□□□ 9.8
CHRD-217ENST00000496527 ZNF484Q5JVG2 852 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 MCTP1Q6DN14 999 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 RUFY4Q6ZNE9 571 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 RSPH3Q86UC2 560 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 TRAPPC12Q8WVT3 735 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 MTIF3Q9H2K0 278 aaKnown RBP25.59■■□□□ 1.69
CHRD-217ENST00000496527 VAV3Q9UKW4 847 aa25.59■■□□□ 1.69
CHRD-217ENST00000496527 NOL7Q9UMY1 257 aaKnown RBP25.59■■□□□ 1.69
CHRD-217ENST00000496527 MCM7P33993 719 aa25.58■■□□□ 1.69
CHRD-217ENST00000496527 OTOP2Q7RTS6 562 aa25.58■■□□□ 1.69
CHRD-217ENST00000496527 HERVK_113Q902F9 699 aa25.58■■□□□ 1.69
CHRD-217ENST00000496527 VWCEQ96DN2 955 aa25.58■■□□□ 1.69
CHRD-217ENST00000496527 NRBP2Q9NSY0 501 aa25.58■■□□□ 1.69
CHRD-217ENST00000496527 COL1A2P08123 1366 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 K7ELQ4 463 aaPredicted RBP25.57■■□□□ 1.68
CHRD-217ENST00000496527 SOX1O00570 391 aaPredicted RBP25.57■■□□□ 1.68
CHRD-217ENST00000496527 ACTN1P12814 892 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 TRAPPC10P48553 1259 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 LARP1BQ659C4 914 aaKnown RBP25.57■■□□□ 1.68
CHRD-217ENST00000496527 TRAF7Q6Q0C0 670 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 CEP131Q9UPN4 1083 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 TANC1Q9C0D5 1861 aa25.57■■□□□ 1.68
CHRD-217ENST00000496527 EML1O00423 815 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 ZNF862O60290 1169 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 NBNO60934 754 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 OATP04181 439 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 RPLP2P05387 115 aaKnown RBP25.56■■□□□ 1.68
CHRD-217ENST00000496527 CTSHP09668 335 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 PRKCEQ02156 737 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 ORC2Q13416 577 aaPredicted RBP25.56■■□□□ 1.68
CHRD-217ENST00000496527 ZNF174Q15697 407 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 UGCGQ16739 394 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 TTC38Q5R3I4 469 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 MTHFD1LQ6UB35 978 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 RPAINQ86UA6 219 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 DNAJB3Q8WWF6 145 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 ZBTB10Q96DT7 871 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 PCDHA12Q9UN75 941 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 PCDHA2Q9Y5H9 948 aa25.56■■□□□ 1.68
CHRD-217ENST00000496527 MYH9P35579 1960 aaKnown RBP25.56■■□□□ 1.68
CHRD-217ENST00000496527 SCN5AQ14524 2016 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 KLRC1P26715 233 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 TXKP42681 527 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 GPNMBQ14956 572 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 RASIP1Q5U651 963 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 NCAPH2Q6IBW4 605 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 BANK1Q8NDB2 785 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 SNX21Q969T3 373 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 LRCH3Q96II8 777 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 MTMR9Q96QG7 549 aa25.55■■□□□ 1.68
CHRD-217ENST00000496527 FAM49AQ9H0Q0 323 aaPredicted RBP25.55■■□□□ 1.68
CHRD-217ENST00000496527 ZBBXA8MT70 800 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 CXCL10P02778 98 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 PSMC5P62195 406 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 MBTPS1Q14703 1052 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 EPHA7Q15375 998 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 FAM26DQ5JW98 314 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
CHRD-217ENST00000496527 TTC12Q9H892 705 aaPredicted RBP25.54■■□□□ 1.68
CHRD-217ENST00000496527 SMIM35A0A1B0GVV1 85 aa25.53■■□□□ 1.68
CHRD-217ENST00000496527 ZBTB42B2RXF5 422 aa25.53■■□□□ 1.68
CHRD-217ENST00000496527 DKC1O60832 514 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHRD-217ENST00000496527 P4HBP07237 508 aaKnown RBP25.53■■□□□ 1.68
CHRD-217ENST00000496527 XKR3Q5GH77 459 aa25.53■■□□□ 1.68
CHRD-217ENST00000496527 INTS4Q96HW7 963 aaKnown RBP25.53■■□□□ 1.68
CHRD-217ENST00000496527 CXXC1Q9P0U4 656 aaPredicted RBP25.53■■□□□ 1.68
CHRD-217ENST00000496527 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.52■■□□□ 1.68
CHRD-217ENST00000496527 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.52■■□□□ 1.68
CHRD-217ENST00000496527 QARSP47897 775 aaKnown RBP25.52■■□□□ 1.68
CHRD-217ENST00000496527 SPIRE1Q08AE8 756 aa25.52■■□□□ 1.68
CHRD-217ENST00000496527 CNKSR3Q6P9H4 555 aa25.52■■□□□ 1.68
CHRD-217ENST00000496527 HSCBQ8IWL3 235 aa25.52■■□□□ 1.68
CHRD-217ENST00000496527 SLC4A7Q9Y6M7 1214 aa25.52■■□□□ 1.68
CHRD-217ENST00000496527 M0QZ92 97 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 MAGEB2O15479 319 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 C22orf31O95567 290 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 CHRNA1P02708 482 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 PDCP20941 246 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 MRPS6P82932 125 aaKnown RBP25.51■■□□□ 1.67
CHRD-217ENST00000496527 SMAD3P84022 425 aaKnown RBP25.51■■□□□ 1.67
CHRD-217ENST00000496527 IER5Q5VY09 327 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 NME8Q8N427 588 aa25.51■■□□□ 1.67
CHRD-217ENST00000496527 SEPT9Q9UHD8 586 aaPredicted RBP25.51■■□□□ 1.67
CHRD-217ENST00000496527 DDX11L8A8MPP1 907 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 BAIAP3O94812 1187 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 OR52Z1P0C646 297 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 TOB1P50616 345 aaPredicted RBP25.5■■□□□ 1.67
CHRD-217ENST00000496527 NBR1Q14596 966 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 WDR81Q562E7 1941 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 METTL13Q8N6R0 699 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 NIFKQ9BYG3 293 aaKnown RBP25.5■■□□□ 1.67
CHRD-217ENST00000496527 CDY2AQ9Y6F7 541 aa25.5■■□□□ 1.67
CHRD-217ENST00000496527 MGAT3Q09327 533 aa25.49■■□□□ 1.67
CHRD-217ENST00000496527 RILPL1Q5EBL4 403 aa25.49■■□□□ 1.67
CHRD-217ENST00000496527 DYDC2Q96IM9 177 aa25.49■■□□□ 1.67
CHRD-217ENST00000496527 LXNQ9BS40 222 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms