RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FOXO4P98177 505 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 CCDC15Q0P6D6 951 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 KRT71Q3SY84 523 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 ARMC3Q5W041 872 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 TMEM154Q6P9G4 183 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 ENDOVQ8N8Q3 282 aaKnown RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 USP38Q8NB14 1042 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 TTLL11Q8NHH1 800 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 INPP4AQ96PE3 977 aaPredicted RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 PIM2Q9P1W9 311 aa9.87□□□□□ -0.83
HPS4-217ENST00000496385 USP15Q9Y4E8 981 aaPredicted RBP9.87□□□□□ -0.83
HPS4-217ENST00000496385 A0A087X0B3 334 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 SSU72P8A0A1W2PR75 194 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 KRT16P08779 473 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 DEUP1Q05D60 604 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 MYBPC3Q14896 1274 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 SH2D4BQ5SQS7 431 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 OR52E8Q6IFG1 317 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ZSCAN29Q8IWY8 852 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 STK32AQ8WU08 396 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 SLX4Q8IY92 1834 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ZSCAN5CA6NGD5 496 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 GOLGA8AA7E2F4 631 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 CCDC188H7C350 402 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 RBAK-RBAKDNI3L0D1 243 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 RANBP6O60518 1105 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 CHN1P15882 459 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 NPR1P16066 1061 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 TMED1Q13445 227 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 PLS1Q14651 629 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 CRY2Q49AN0 593 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 MYLK4Q86YV6 388 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 LRRC34Q8IZ02 419 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 TTLL6Q8N841 843 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 UBLCP1Q8WVY7 318 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 SEC14L1Q92503 715 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 NCSTNQ92542 709 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 PHKBQ93100 1093 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 MASTLQ96GX5 879 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ELAC2Q9BQ52 826 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 RXFP1Q9HBX9 757 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 PDP2Q9P2J9 529 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 FBXL5Q9UKA1 691 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ZNF232Q9UNY5 417 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 XDHP47989 1333 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 F8VZ95 297 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 M0R2C6 588 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 AKR1B10O60218 316 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 DEXIO95424 95 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 RPN1P04843 607 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 NUDT17P0C025 328 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 DESP17661 470 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ALDH1B1P30837 517 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 RCAN1P53805 252 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 DALRD3Q5D0E6 543 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 RBBP8NLQ8NC74 664 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 SCFD2Q8WU76 684 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 TUBGCP2Q9BSJ2 902 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 TIPINQ9BVW5 301 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 SLC26A6Q9BXS9 759 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 ATP8A2Q9NTI2 1148 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 FAM217BQ9NTX9 383 aaPredicted RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 INTS9Q9NV88 658 aaKnown RBP9.86□□□□□ -0.83
HPS4-217ENST00000496385 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 EHD2Q9NZN4 543 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 VPS54Q9P1Q0 977 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
HPS4-217ENST00000496385 PSMA7O14818 248 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 GJB6O95452 261 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ITGA6P23229 1130 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 PRCPP42785 496 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 POLE2P56282 527 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 USP4Q13107 963 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ZRSR2Q15696 482 aaKnown RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 WASHC2DQ5SRD0 308 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 FKBP15Q5T1M5 1219 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 TMC3Q7Z5M5 1100 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
HPS4-217ENST00000496385 DNAJC9Q8WXX5 260 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 OSBP2Q969R2 916 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 DHTKD1Q96HY7 919 aaPredicted RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 EPSTI1Q96J88 318 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 IWS1Q96ST2 819 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 PIDD1Q9HB75 910 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ABCF3Q9NUQ8 709 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ARHGAP20Q9P2F6 1191 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 LRCH1Q9Y2L9 728 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms