RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 NACC1Q96RE7 527 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 C16orf70Q9BSU1 422 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 SMARCAD1Q9H4L7 1026 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 BLOC1S4Q9NUP1 217 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 SERTAD1Q9UHV2 236 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 EMSYQ7Z589 1322 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 IGSF9BQ9UPX0 1349 aa24.38■■□□□ 1.49
ECHDC3-205ENST00000496136 MYADML2A6NDP7 307 aa24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 DKC1O60832 514 aaKnown RBP eCLIP24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 TRMT1LQ7Z2T5 733 aaKnown RBP24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 PIGOQ8TEQ8 1089 aa24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 PAK6Q9NQU5 681 aaPredicted RBP24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 DNM3Q9UQ16 869 aa24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 STBD1O95210 358 aa24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 STK17AQ9UEE5 414 aa24.37■■□□□ 1.49
ECHDC3-205ENST00000496136 ACTN4O43707 911 aaKnown RBP24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 SLFN14P0C7P3 912 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 XRCC6P12956 609 aaKnown RBP eCLIP24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 CCL5P13501 91 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 KRBA2Q6ZNG9 492 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 KLHDC9Q8NEP7 349 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 ARMC5Q96C12 935 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 ZNF333Q96JL9 665 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 RNF208Q9H0X6 261 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 USP25Q9UHP3 1055 aa24.36■■□□□ 1.49
ECHDC3-205ENST00000496136 KINO60870 393 aaKnown RBP24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 ZNF286BP0CG31 522 aa24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 YWHABP31946 246 aaKnown RBP24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 SLC26A2P50443 739 aa24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 RAD54LQ92698 747 aa24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 TIGD1Q96MW7 591 aa24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 ERAP1Q9NZ08 941 aa24.35■■□□□ 1.49
ECHDC3-205ENST00000496136 H3BRB1 525 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 PRKCEQ02156 737 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 KLHL40Q2TBA0 621 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 SKOR2Q2VWA4 1001 aaPredicted RBP24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 ANO5Q75V66 913 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CKAP2LQ8IYA6 745 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CNNM3Q8NE01 707 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 LARP4BQ92615 738 aaKnown RBP24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CUEDC2Q9H467 287 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 TUT1Q9H6E5 874 aaKnown RBP24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 TRAK2O60296 914 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 EYA4O95677 639 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 MARK3P27448 753 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CST5P28325 142 aaPredicted RBP24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 XKR3Q5GH77 459 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CCSAPQ6IQ19 270 aaPredicted RBP24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 CEP57L1Q8IYX8 460 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 BHMT2Q9H2M3 363 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 RNPEPQ9H4A4 650 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 BRCA2P51587 3418 aa24.34■■□□□ 1.49
ECHDC3-205ENST00000496136 TMEM150BA6NC51 233 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 MYCNP04198 464 aaPredicted RBP24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 MYL3P08590 195 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 PURAQ00577 322 aaKnown RBP24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 MCM6Q14566 821 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 RNF180Q86T96 592 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 KAT2BQ92831 832 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 DEFB118Q96PH6 123 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 MTRQ99707 1265 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 KBTBD4Q9NVX7 518 aa24.33■■□□□ 1.49
ECHDC3-205ENST00000496136 KPNA6O60684 536 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 OATP04181 439 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 PLA2G4BP0C869 781 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 PLCB4Q15147 1175 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 LRRC41Q15345 812 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 KCNA10Q16322 511 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 OTUD6AQ7L8S5 288 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 STAMQ92783 540 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 NRBP2Q9NSY0 501 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 ANKEF1Q9NU02 776 aa24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 DBR1Q9UK59 544 aaKnown RBP24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 ZNF215Q9UL58 517 aaPredicted RBP24.32■■□□□ 1.48
ECHDC3-205ENST00000496136 ZEB2O60315 1214 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 F2P00734 622 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 SLC12A3P55017 1021 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 DHX8Q14562 1220 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 SV2BQ7L1I2 683 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 SYT2Q8N9I0 419 aaPredicted RBP24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 ATP8B4Q8TF62 1192 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 BBXQ8WY36 941 aaPredicted RBP24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 PAGE5Q96GU1 130 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 SH2D3AQ9BRG2 576 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 FRMPD3Q5JV73 1810 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 RARRES1P49788 294 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 NPEPPSP55786 919 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 SH3RF1Q7Z6J0 888 aa24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 PCSK9Q8NBP7 692 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 NIFKQ9BYG3 293 aaKnown RBP24.31■■□□□ 1.48
ECHDC3-205ENST00000496136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 CAPN15O75808 1086 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 SSBP05455 408 aaKnown RBP eCLIP24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 ASGR1P07306 291 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 AFMP43652 599 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 MDM2Q00987 491 aaPredicted RBP24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 CAMK4Q16566 473 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 PLA2G4FQ68DD2 849 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 KANK3Q6NY19 840 aa24.3■■□□□ 1.48
ECHDC3-205ENST00000496136 CXCL17Q6UXB2 119 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms