RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 ZBED9Q6R2W3 1325 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 PIEZO2Q9H5I5 2752 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 CFAP46Q8IYW2 2715 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 C2orf71A6NGG8 1288 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 KCNK5O95279 499 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 TTLL1O95922 423 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 MYBP10242 640 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 ARHGAP4P98171 946 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 SP2Q02086 613 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 SRSF5Q13243 272 aaKnown RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 SF3A2Q15428 464 aaKnown RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 ZNF528Q3MIS6 628 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 PHLDB3Q6NSJ2 640 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 PSAPL1Q6NUJ1 521 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 TMC7Q7Z402 723 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 PDZD3Q86UT5 571 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 ACSF2Q96CM8 615 aaPredicted RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 SPATA33Q96N06 139 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 HNRNPABQ99729 332 aaKnown RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 WASF3Q9UPY6 502 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
GARNL3-219ENST00000495172 TEP1Q99973 2627 aaKnown RBP10.51□□□□□ -0.73
GARNL3-219ENST00000495172 NMT2O60551 498 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 IGSF3O75054 1194 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 FBXO47Q5MNV8 452 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 RCSD1Q6JBY9 416 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 LMBR1Q8WVP7 490 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 MRPS27Q92552 414 aaKnown RBP10.5□□□□□ -0.73
GARNL3-219ENST00000495172 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 CWH43Q9H720 699 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 FBXO4Q9UKT5 387 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 MRVI1Q9Y6F6 885 aa10.5□□□□□ -0.73
GARNL3-219ENST00000495172 FRMPD2Q68DX3 1309 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-219ENST00000495172 LOC102724159A0A0B4J2E5 919 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 FSD2A1L4K1 749 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 H3BRB1 525 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 HAX1O00165 279 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 TBC1D4O60343 1298 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 FGFR1P11362 822 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 SRFP11831 508 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 SCG2P13521 617 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 TMEM62Q0P6H9 643 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 UBXN2BQ14CS0 331 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 PWP2Q15269 919 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 PTPN14Q15678 1187 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 TMEM266Q2M3C6 531 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 USH1GQ495M9 461 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 CCDC149Q6ZUS6 474 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 OTOP3Q7RTS5 596 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 DNERQ8NFT8 737 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 NELL1Q92832 810 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 EMID1Q96A84 441 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 MYADMQ96S97 322 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 TMX1Q9H3N1 280 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 TUT1Q9H6E5 874 aaKnown RBP10.49□□□□□ -0.73
GARNL3-219ENST00000495172 GPCPD1Q9NPB8 672 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 CDY2AQ9Y6F7 541 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 ZNF462Q96JM2 2506 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 LAMA4Q16363 1823 aa10.49□□□□□ -0.73
GARNL3-219ENST00000495172 ASXL3Q9C0F0 2248 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 MGEA5O60502 916 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 CAND2O75155 1236 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 PPFIA4O75335 1185 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 GGPS1O95749 300 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 LGALS2P05162 132 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 HOXC13P31276 330 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 ADD2P35612 726 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 ADAM17P78536 824 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 CSRP2Q16527 193 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 COL28A1Q2UY09 1125 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 PDE12Q6L8Q7 609 aaKnown RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 LRRC55Q6ZSA7 311 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 MRPL43Q8N983 215 aaKnown RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 DNAJB3Q8WWF6 145 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 SMOC1Q9H4F8 434 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-219ENST00000495172 LRFN2Q9ULH4 789 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 MYH15Q9Y2K3 1946 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
GARNL3-219ENST00000495172 PLA2G6O60733 806 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 RETP07949 1114 aa10.47□□□□□ -0.73
GARNL3-219ENST00000495172 AASDHQ4L235 1098 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms