RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 P4HBP07237 508 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 IRX3P78415 501 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 RAD51AP2Q09MP3 1159 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 LRRC41Q15345 812 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 RINT1Q6NUQ1 792 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 NLRX1Q86UT6 975 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 RIOX2Q8IUF8 465 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 GLIS3Q8NEA6 775 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 CNOT6LQ96LI5 555 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 PKD2L1Q9P0L9 805 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 COL4A3BPQ9Y5P4 624 aa20.47■□□□□ 0.87
TSPAN4-212ENST00000494815 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 DDX39AO00148 427 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 ARHGAP6O43182 974 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 TBCAO75347 108 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 GAP43P17677 238 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 ZCWPW2Q504Y3 356 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 TC2NQ8N9U0 490 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 CARD6Q9BX69 1037 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 ZSWIM4Q9H7M6 989 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 AGTPBP1Q9UPW5 1226 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 PFASO15067 1338 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 KRT76Q01546 638 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 LDLRAD1Q5T700 205 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 C1orf186Q6ZWK4 172 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 PPFIBP1Q86W92 1011 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 TMEM139Q8IV31 216 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 TUBGCP2Q9BSJ2 902 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 ZHX3Q9H4I2 956 aa20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 WRAP73Q9P2S5 460 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-212ENST00000494815 A0A1W2PQC6 194 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 UNCXA6NJT0 531 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 SFNP31947 248 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 JAK3P52333 1124 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 TRIM14Q14142 442 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 DNERQ8NFT8 737 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 SCFD1Q8WVM8 642 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 OPTNQ96CV9 577 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 CDHR1Q96JP9 859 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 IWS1Q96ST2 819 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 BTBD7Q9P203 1132 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 TCEAL9Q9UHQ7 104 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 GOLGA6L9A6NEM1 432 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 LYPLA2O95372 231 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 UBXN1Q04323 297 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 FASTKD5Q7L8L6 764 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 SFR1Q86XK3 245 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 BANK1Q8NDB2 785 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 RDM1Q8NG50 284 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 ZNF507Q8TCN5 953 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 OLFML3Q9NRN5 406 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 TBC1D7Q9P0N9 293 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 PPP2R2CQ9Y2T4 447 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
TSPAN4-212ENST00000494815 AKR1B15C9JRZ8 316 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 DNM2P50570 870 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 FKBP3Q00688 224 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 TEX35Q5T0J7 233 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 PPP4R3CPQ6ZMV5 832 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 PANX2Q96RD6 677 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 FGFBP2Q9BYJ0 223 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 WDR64B1ANS9 1081 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 ATP9AO75110 1047 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 MTIF2P46199 727 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 QARSP47897 775 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 HERVK_113P62684 666 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 EPM2AIP1Q7L775 607 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 UBXN6Q9BZV1 441 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 ODF2LQ9ULJ1 636 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 SAMM50Q9Y512 469 aa20.44■□□□□ 0.86
TSPAN4-212ENST00000494815 STX10O60499 249 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 GUCY2CP25092 1073 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 GOLGA8FQ08AF8 430 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 GOLGA8DPQ0D2H9 430 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 MOGSQ13724 837 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 GNPTABQ3T906 1256 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 CNGA4Q8IV77 575 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 ANKRD35Q8N283 1001 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 EEF2KMTQ96G04 330 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 CEP63Q96MT8 703 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 SENP7Q9BQF6 1050 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 KCTD10Q9H3F6 313 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 SEL1LQ9UBV2 794 aa20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 DBR1Q9UK59 544 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-212ENST00000494815 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 ZBTB39O15060 712 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 ADKP55263 362 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 RBL2Q08999 1139 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 ZNF746Q6NUN9 644 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 CCDC51Q96ER9 411 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 BAG1Q99933 345 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 RSPH10B2B2RC85 870 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 MFAP3LO75121 409 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 FAM13AO94988 1023 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms