RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 CDY2AQ9Y6F7 541 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 GLP2RO95838 553 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 MMP1P03956 469 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 RB1P06400 928 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 GNAT1P11488 350 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 NDUFV1P49821 464 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 ANTXR2P58335 489 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 PPFIA1Q13136 1202 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 SMAD4Q13485 552 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 GRIK4Q16099 956 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 GNPTABQ3T906 1256 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 SPPL3Q8TCT6 385 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 MSLNLQ96KJ4 702 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 FAM86C1Q9NVL1 165 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 ZNF215Q9UL58 517 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 FAM50BQ9Y247 325 aa13.43□□□□□ -0.26
CSNK1E-212ENST00000494610 NRCAMQ92823 1304 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 PER2O15055 1255 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 KCNA2P16389 499 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 ITGB5P18084 799 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 NRIP1P48552 1158 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 RCAN1P53805 252 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 AK2P54819 239 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 UBE2SQ16763 222 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 TMEM266Q2M3C6 531 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 Q6ZUG5 572 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 EDAQ92838 391 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 PCYT2Q99447 389 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
CSNK1E-212ENST00000494610 SPTBN4Q9H254 2564 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 TMEM221A6NGB7 291 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 M0R296 226 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 RXRAP19793 462 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 LIFRP42702 1097 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 WTAPQ15007 396 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 SYNE3Q6ZMZ3 975 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 VN1R2Q8NFZ6 395 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 POF1BQ8WVV4 589 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 MFSD14AQ96MC6 490 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 CDH22Q9UJ99 828 aa13.41□□□□□ -0.26
CSNK1E-212ENST00000494610 MBLAC1A4D2B0 266 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 SH2B2O14492 632 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 INSRRP14616 1297 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 VCPP55072 806 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 TCF15Q12870 199 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 GLG1Q92896 1179 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 BRF1Q92994 677 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 APOL5Q9BWW9 433 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 PADI3Q9ULW8 664 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 USP15Q9Y4E8 981 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 KMT2EQ8IZD2 1858 aa13.4□□□□□ -0.26
CSNK1E-212ENST00000494610 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 NCK2O43639 380 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 MGEA5O60502 916 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 STAM2O75886 525 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 EYA4O95677 639 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 SP100P23497 879 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 ZXDAP98168 799 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-212ENST00000494610 DCHS1Q96JQ0 3298 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 PDGFBP01127 241 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CALM1P0DP23 149 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CALM2P0DP24 149 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CALM3P0DP25 149 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 CPA1P15085 419 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 EVCP57679 992 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 ERVFC1P60507 584 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
CSNK1E-212ENST00000494610 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms