RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 STIM1Q13586 685 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 TTLL12Q14166 644 aaPredicted RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 CTTNQ14247 550 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 GNPTABQ3T906 1256 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 TCP11X2Q5H9J9 407 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 FAM26FQ5R3K3 315 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 CCDC186Q7Z3E2 898 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 MIER3Q7Z3K6 550 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 ZNF467Q7Z7K2 595 aaPredicted RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 GPBP1Q86WP2 473 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 TPH2Q8IWU9 490 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 CCDC65Q8IXS2 484 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 TRMT44Q8IYL2 757 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 DAW1Q8N136 415 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 SCFD1Q8WVM8 642 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 CEP89Q96ST8 783 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 REEP2Q9BRK0 252 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 LXNQ9BS40 222 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 ST6GALNAC4Q9H4F1 302 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 NRBP1Q9UHY1 535 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 CTNND2Q9UQB3 1225 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 DIS3Q9Y2L1 958 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 PCDHA10Q9Y5I2 948 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 MAFBQ9Y5Q3 323 aaPredicted RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 ITIH6Q6UXX5 1313 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 NPHP3-ACAD11A0A0J9YXS1 232 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 A0A1W2PQC6 194 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 B4DLN1 442 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 PDHXO00330 501 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 PDXKO00764 312 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ZBTB39O15060 712 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 EIF3DO15371 548 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH5-217ENST00000494458 ZNF862O60290 1169 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 MYCLP12524 364 aaPredicted RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 RARRES1P49788 294 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 STX17P56962 302 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 GSDMDP57764 484 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 RTP1P59025 263 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 PSMC5P62195 406 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 CYP4A11Q02928 519 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ARID5BQ14865 1188 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 KRT31Q15323 416 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 EDRF1Q3B7T1 1238 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ZNF792Q3KQV3 632 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 CCDC62Q6P9F0 684 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 KCNV1Q6PIU1 500 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 MAMDC4Q6UXC1 1216 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 LRRC55Q6ZSA7 311 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ZNF720Q7Z2F6 126 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 FILIP1Q7Z7B0 1213 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 SAPCD2Q86UD0 394 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 LRRC8AQ8IWT6 810 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 MYOCDQ8IZQ8 938 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ANKRD35Q8N283 1001 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 KIAA1524Q8TCG1 905 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 PIGOQ8TEQ8 1089 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 HPS3Q969F9 1004 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 HHIPL1Q96JK4 782 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 UIMC1Q96RL1 719 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 NTPCRQ9BSD7 190 aaKnown RBP7.54□□□□□ -1.2
MSH5-217ENST00000494458 RUSC1Q9BVN2 902 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 FGFBP2Q9BYJ0 223 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 BCAS3Q9H6U6 928 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 SLC39A2Q9NP94 309 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 COL4A3BPQ9Y5P4 624 aa7.54□□□□□ -1.2
MSH5-217ENST00000494458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH5-217ENST00000494458 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 IGSF9BQ9UPX0 1349 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CCL15-CCL14A0A0B4J2E2 113 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 TRIM49BA6NDI0 452 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 KCNJ18B7U540 433 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 TEX33O43247 280 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
MSH5-217ENST00000494458 KIF20AO95235 890 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CYP2C8P10632 490 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 PRKCSHP14314 528 aaPredicted RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 ATP4AP20648 1035 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CLCN1P35523 988 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 COPB1P53618 953 aaKnown RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 INHBEP58166 350 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 ACTR2P61160 394 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CCNA1P78396 465 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 MYBPC2Q14324 1141 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 KCNJ12Q14500 433 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 PLS1Q14651 629 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CCL15Q16663 113 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 UGCGQ16739 394 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 HERC4Q5GLZ8 1057 aaPredicted RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 MIIPQ5JXC2 388 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms