RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PDE4BQ07343 736 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 KLRC3Q07444 240 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 PPARAQ07869 468 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 CACNB2Q08289 660 aaPredicted RBP9.58□□□□□ -0.88
RIF1-211ENST00000494333 PSMD2Q13200 908 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 MAP3K21Q5TCX8 1036 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 UBE2Q1Q7Z7E8 422 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 DPP9Q86TI2 863 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 CHD1LQ86WJ1 897 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 TMEM151AQ8N4L1 468 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 MB21D1Q8N884 522 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 RILPL2Q969X0 211 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 PAWRQ96IZ0 340 aaKnown RBP9.58□□□□□ -0.88
RIF1-211ENST00000494333 APBA2Q99767 749 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 HTATIP2Q9BUP3 242 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 OSGEPQ9NPF4 335 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 HELLSQ9NRZ9 838 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 FBXO28Q9NVF7 368 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 MGAMO43451 1857 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FOXP2O15409 715 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 TSPY3P0CV98 308 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 TSPY8P0CW00 308 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 SELPP16109 830 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 EIF4BP23588 611 aaKnown RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 GSTT1P30711 240 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 CD68P34810 354 aaPredicted RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 TFAP4Q01664 338 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 NUCB1Q02818 461 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 C19orf57Q0VDD7 668 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 GRB14Q14449 540 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 TMEM132BQ14DG7 1078 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 RPS26P11Q5JNZ5 115 aaPredicted RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 FAM47AQ5JRC9 791 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 VPS53Q5VIR6 699 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 MFSD14CQ5VZR4 134 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 NPLOC4Q8TAT6 608 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 CEP95Q96GE4 821 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FAM227BQ96M60 508 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 NUP88Q99567 741 aaPredicted RBP9.57□□□□□ -0.88
RIF1-211ENST00000494333 MROH8Q9H579 483 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 MTMR4Q9NYA4 1195 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 KCNK4Q9NYG8 393 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FLRT1Q9NZU1 646 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 FAM8A1Q9UBU6 413 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 ADAMTS5Q9UNA0 930 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 PDE4DIPQ5VU43 2346 aa9.57□□□□□ -0.88
RIF1-211ENST00000494333 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 H0YGN5 161 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 VWA5AO00534 786 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 TTLL1O95922 423 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 NDUFB10O96000 172 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 HOXC6P09630 235 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 ADORA2AP29274 412 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 CCND3P30281 292 aaPredicted RBP9.56□□□□□ -0.88
RIF1-211ENST00000494333 CYP2C19P33261 490 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 STAT3P40763 770 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 ARL4DP49703 201 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
RIF1-211ENST00000494333 MCMDC2Q4G0Z9 681 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 IGF2-ASQ6U949 168 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 NECAB2Q7Z6G3 386 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 SHCBP1Q8NEM2 672 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 MKL1Q969V6 931 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 SOX17Q9H6I2 414 aaPredicted RBP9.56□□□□□ -0.88
RIF1-211ENST00000494333 ZFYVE1Q9HBF4 777 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 PPP1R9AQ9ULJ8 1098 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 DOCK3Q8IZD9 2030 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 BAZ2AQ9UIF9 1905 aaKnown RBP9.56□□□□□ -0.88
RIF1-211ENST00000494333 BRCA2P51587 3418 aa9.56□□□□□ -0.88
RIF1-211ENST00000494333 RBBP6Q7Z6E9 1792 aaKnown RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 A0A0D9SFI3 127 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 TSPY2A6NKD2 308 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 COBLO75128 1261 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 SLC25A27O95847 323 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 B3GALT4O96024 378 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 FGAP02671 866 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 FCER1AP12319 257 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 ZNF16P17020 682 aaPredicted RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 CNGA1P29973 690 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 RIOX2Q8IUF8 465 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 LRRC47Q8N1G4 583 aaKnown RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 PRPF38AQ8NAV1 312 aaKnown RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 DIS3LQ8TF46 1054 aaKnown RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 FOXD4L4Q8WXT5 416 aaPredicted RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 SLF1Q9BQI6 1058 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 SLC5A4Q9NY91 659 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms