RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 IER5LQ5T953 404 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 CCDC155Q8N6L0 562 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 PHOSPHO2Q8TCD6 241 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 GDPD5Q8WTR4 605 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 LMBR1Q8WVP7 490 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 KCNB2Q92953 911 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 ATP6V0A1Q93050 837 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 NEK1Q96PY6 1258 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 LZTS2Q9BRK4 669 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
HDAC6-234ENST00000493923 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 SLC12A7Q9Y666 1083 aa9.26□□□□□ -0.93
HDAC6-234ENST00000493923 KLF18A0A0U1RQI7 1052 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 LINC01553A4QN01 128 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 RSPH10B2B2RC85 870 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 STXBP3O00186 592 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 NOP56O00567 594 aaKnown RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 CDC45O75419 566 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 BAIAP3O94812 1187 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 GJB5O95377 273 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 CHRNA1P02708 482 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 RSPH10BP0C881 870 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 ARP10275 920 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 MARK3P27448 753 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 ADD1P35611 737 aaKnown RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TCF7P36402 384 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TNNT3P45378 269 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 KCNJ6P48051 423 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 GNAQP50148 359 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 KCNQ1P51787 676 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 APOBRQ0VD83 1088 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TRAF1Q13077 416 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 ITGB3BPQ13352 177 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 NEDD9Q14511 834 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 RABEP1Q15276 862 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TERF2Q15554 542 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 GNPTABQ3T906 1256 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 PLEKHG4Q58EX7 1191 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 MARCH8Q5T0T0 291 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 DHX32Q7L7V1 743 aaKnown RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TMTC2Q8N394 836 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 CEP120Q8N960 986 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 TRAPPC12Q8WVT3 735 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 CUL5Q93034 780 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 SENP7Q9BQF6 1050 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-234ENST00000493923 EVPLQ92817 2033 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 COL4A6Q14031 1691 aa9.25□□□□□ -0.93
HDAC6-234ENST00000493923 GOLGA8AA7E2F4 631 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 GOLGA8BA8MQT2 603 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 EDIL3O43854 480 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 DTNBO60941 627 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 STAM2O75886 525 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 CALM1P0DP23 149 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 CALM2P0DP24 149 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 CALM3P0DP25 149 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-234ENST00000493923 MGAT3Q09327 533 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 RTN1Q16799 776 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 XRRA1Q6P2D8 792 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 GOLGA6L1Q8N7Z2 621 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 ASB2Q96Q27 587 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 C17orf80Q9BSJ5 609 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 USP26Q9BXU7 913 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 JADE2Q9NQC1 790 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 THEGQ9P2T0 379 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 WDR81Q562E7 1941 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 TTC3P53804 2025 aa9.24□□□□□ -0.93
HDAC6-234ENST00000493923 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 SMTNL1A8MU46 457 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ZBTB43O43298 467 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 CCNE2O96020 404 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
HDAC6-234ENST00000493923 NAPAP54920 295 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ERVK-21P61565 698 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 IKBKEQ14164 716 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 GRIK4Q16099 956 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 PKN1Q16512 942 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 FAM26DQ5JW98 314 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 JAKMIP3Q5VZ66 844 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 Q6ZUG5 572 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 NLRX1Q86UT6 975 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 MYOCDQ8IZQ8 938 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ADAMTS19Q8TE59 1207 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 LINC01599Q8WXQ3 324 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 RAD9AQ99638 391 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms