RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 PFKMP08237 780 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 POLR2MP0CAP2 368 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 GSPT1P15170 499 aaKnown RBP8.73□□□□□ -1.01
RBM39-238ENST00000493853 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
RBM39-238ENST00000493853 LAMC2Q13753 1193 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 DGKDQ16760 1214 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 TMEM67Q5HYA8 995 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 RASIP1Q5U651 963 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 KCNV1Q6PIU1 500 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 CYB5R4Q7L1T6 521 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 CATIPQ7Z7H3 387 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 DHX37Q8IY37 1157 aaKnown RBP8.73□□□□□ -1.01
RBM39-238ENST00000493853 SAMD3Q8N6K7 520 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 C7orf31Q8N865 590 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 AFG1LQ8WV93 481 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 PPM1EQ8WY54 764 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 MAD2L2Q9UI95 211 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 PLXNA1Q9UIW2 1896 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
RBM39-238ENST00000493853 KIF28PB7ZC32 967 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 E7EWF7 191 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 ARIH2O95376 493 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 CYP21A2P08686 494 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 ATP2A2P16615 1042 aaKnown RBP8.72□□□□□ -1.01
RBM39-238ENST00000493853 IGFBP4P22692 258 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 RFC2P35250 354 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PTH1RQ03431 593 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 SEC23AQ15436 765 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PTGISQ16647 500 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 CCDC62Q6P9F0 684 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 CASC1Q6TDU7 716 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PPP1R13LQ8WUF5 828 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PIGSQ96S52 555 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 KATNAL1Q9BW62 490 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 WNT8AQ9H1J5 351 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 NKX2-4Q9H2Z4 354 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PRDM12Q9H4Q4 367 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PXMP2Q9NR77 195 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
RBM39-238ENST00000493853 COL20A1Q9P218 1284 aa8.72□□□□□ -1.01
RBM39-238ENST00000493853 PNMA6FA0A0J9YX94 578 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 SGSM2O43147 1006 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 MMP3P08254 477 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 CCND2P30279 289 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 HOXA13P31271 388 aaPredicted RBP8.71□□□□□ -1.02
RBM39-238ENST00000493853 KIF5BP33176 963 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 HSD17B4P51659 736 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 ARHGAP1Q07960 439 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 GRM4Q14833 912 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 C4orf17Q53FE4 359 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 FCHSD1Q86WN1 690 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 TMTC2Q8N394 836 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.02
RBM39-238ENST00000493853 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 PIBF1Q8WXW3 757 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 CUL5Q93034 780 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
RBM39-238ENST00000493853 SPATA33Q96N06 139 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 IL25Q9H293 177 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 MLXIPQ9HAP2 919 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
RBM39-238ENST00000493853 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
RBM39-238ENST00000493853 COL6A3P12111 3177 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 CCDC69A6NI79 296 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 LZTS3O60299 673 aaPredicted RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 SORBS3O60504 671 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 PPFIA4O75335 1185 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 PARNO95453 639 aaKnown RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 IQCF3P0C7M6 154 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 TGFB3P10600 412 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 KCNJ6P48051 423 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 RABGGTBP53611 331 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 PGM5Q15124 567 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 CCDC85BQ15834 202 aaPredicted RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 GNPTABQ3T906 1256 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 VSIG10LQ86VR7 867 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 RHBDD1Q8TEB9 315 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 AFAP1L1Q8TED9 768 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 MTMR8Q96EF0 704 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 RRP36Q96EU6 259 aaKnown RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 PDCD2LQ9BRP1 358 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 SEC63Q9UGP8 760 aaKnown RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 PCDHA11Q9Y5I1 949 aa8.7□□□□□ -1.02
RBM39-238ENST00000493853 RBM8AQ9Y5S9 174 aaKnown RBP8.7□□□□□ -1.02
RBM39-238ENST00000493853 LTBP2Q14767 1821 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 NOP56O00567 594 aaKnown RBP8.69□□□□□ -1.02
RBM39-238ENST00000493853 PPP1R11O60927 126 aaPredicted RBP8.69□□□□□ -1.02
RBM39-238ENST00000493853 GGPS1O95749 300 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 SELPP16109 830 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 MCM5P33992 734 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 GNAQP50148 359 aa8.69□□□□□ -1.02
RBM39-238ENST00000493853 TROAPQ12815 778 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms