RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 ARVCFO00192 962 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 TLR3O15455 904 aaKnown RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 SMIM10L2AP0DMW4 78 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 SMIM10L2BP0DMW5 78 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 ATN1P54259 1190 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PSMC6P62333 389 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PTPN11Q06124 597 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PPFIA1Q13136 1202 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PLCB4Q15147 1175 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 IL17AQ16552 155 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 UGCGQ16739 394 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 NBPF20Q3BBV1 942 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 NFRKBQ6P4R8 1299 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 C4orf19Q8IY42 314 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 EXOC8Q8IYI6 725 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 ZNF579Q8NAF0 562 aaKnown RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 KAT2BQ92831 832 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PCYT2Q99447 389 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 HSD17B14Q9BPX1 270 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PYM1Q9BRP8 204 aaKnown RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 HTATIP2Q9BUP3 242 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 GDPD2Q9HCC8 539 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 DDX19AQ9NUU7 478 aaKnown RBP8.5□□□□□ -1.05
VEGFA-214ENST00000493786 RGL1Q9NZL6 768 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PCDHA7Q9UN72 937 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 DNM3Q9UQ16 869 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 PPME1Q9Y570 386 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 NRCAMQ92823 1304 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 FRMPD3Q5JV73 1810 aa8.5□□□□□ -1.05
VEGFA-214ENST00000493786 MYH15Q9Y2K3 1946 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 ARHGEF35A5YM69 484 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 DCDC2CA8MYV0 355 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 HAS3O00219 553 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 MED24O75448 989 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 SLITRK3O94933 977 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 LYPLA2O95372 231 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CDC25AP30304 524 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 YWHABP31946 246 aaKnown RBP8.49□□□□□ -1.05
VEGFA-214ENST00000493786 IGBP1P78318 339 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 GRIN1Q05586 938 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 GRIK4Q16099 956 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 MTERF2Q49AM1 385 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 XKR9Q5GH70 373 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 ZNF484Q5JVG2 852 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 SPECC1Q5M775 1068 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 SLC39A5Q6ZMH5 540 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CCDC73Q6ZRK6 1079 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CATSPER3Q86XQ3 398 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CHAMP1Q96JM3 812 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CEP170P1Q96L14 293 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 JPH2Q9BR39 696 aaPredicted RBP8.49□□□□□ -1.05
VEGFA-214ENST00000493786 CCSER1Q9C0I3 900 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 RNPEPQ9H4A4 650 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 HDAC6Q9UBN7 1215 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 KIAA1024Q9UPX6 916 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 ATP11BQ9Y2G3 1177 aa8.49□□□□□ -1.05
VEGFA-214ENST00000493786 COL1A2P08123 1366 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 A0A1W2PQ27 194 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 A0A1W2PQ64 194 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 A0A1W2PQD8 194 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 ZNF862O60290 1169 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 SSBP05455 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 SPATA31C1P0DKV0 1188 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 COL6A1P12109 1028 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 XRCC6P12956 609 aaKnown RBP eCLIP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 INSRRP14616 1297 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 PLCG1P19174 1290 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 CMA1P23946 247 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 TMOD1P28289 359 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 RFC5P40937 340 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 STAT6P42226 847 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 POLGP54098 1239 aaPredicted RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 TBC1D8BQ0IIM8 1120 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 KARSQ15046 597 aaKnown RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 PTGISQ16647 500 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 HYIQ5T013 277 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 RRAGBQ5VZM2 374 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 PLA2G4FQ68DD2 849 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 RSPH3Q86UC2 560 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 SESTD1Q86VW0 696 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 SLC7A3Q8WY07 619 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 MRPS27Q92552 414 aaKnown RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 CCDC34Q96HJ3 373 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 EPSTI1Q96J88 318 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 PLIN2Q99541 437 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 NIFKQ9BYG3 293 aaKnown RBP8.48□□□□□ -1.05
VEGFA-214ENST00000493786 CYP26B1Q9NR63 512 aa8.48□□□□□ -1.05
VEGFA-214ENST00000493786 ANKEF1Q9NU02 776 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 446.9 ms