RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 HAS3O00219 553 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
LSM2-214ENST00000493387 MED24O75448 989 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 OATP04181 439 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 PTMSP20962 102 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 PSEN2P49810 448 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
LSM2-214ENST00000493387 PRKCEQ02156 737 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 MFSD10Q14728 455 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
LSM2-214ENST00000493387 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 KAT2BQ92831 832 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 VTI1AQ96AJ9 217 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 KCNH3Q9ULD8 1083 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 KIAA1024Q9UPX6 916 aa12.92□□□□□ -0.34
LSM2-214ENST00000493387 RRN3P2A6NIE6 340 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 ZNF862O60290 1169 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 GNAT1P11488 350 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 PTPN11Q06124 597 aaPredicted RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 GRB10Q13322 594 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 PLCB4Q15147 1175 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 UGCGQ16739 394 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 CCDC43Q96MW1 224 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 NIFKQ9BYG3 293 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
LSM2-214ENST00000493387 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 COL1A2P08123 1366 aa12.91□□□□□ -0.34
LSM2-214ENST00000493387 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
LSM2-214ENST00000493387 EYA4O95677 639 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 PFKFB1P16118 471 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 PLCG1P19174 1290 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 ATP4AP20648 1035 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 MARK3P27448 753 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 STAT6P42226 847 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 SYKP43405 635 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
LSM2-214ENST00000493387 NFRKBQ6P4R8 1299 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 C7orf31Q8N865 590 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
LSM2-214ENST00000493387 RNPEPQ9H4A4 650 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 STARD7Q9NQZ5 370 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 PCNTO95613 3336 aa12.9□□□□□ -0.34
LSM2-214ENST00000493387 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
LSM2-214ENST00000493387 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
LSM2-214ENST00000493387 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
LSM2-214ENST00000493387 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 MAGEB2O15479 319 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
LSM2-214ENST00000493387 STBD1O95210 358 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 MCM4P33991 863 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 PPFIA1Q13136 1202 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 ITGA7Q13683 1181 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 ECM1Q16610 540 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 XKR9Q5GH70 373 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
LSM2-214ENST00000493387 WRAP73Q9P2S5 460 aaPredicted RBP12.89□□□□□ -0.35
LSM2-214ENST00000493387 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
LSM2-214ENST00000493387 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
LSM2-214ENST00000493387 SMIM10L2AP0DMW4 78 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 SMIM10L2BP0DMW5 78 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 INSRRP14616 1297 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms