RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 B4DLN1 442 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 TRAF5O00463 557 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 EIF3DO15371 548 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ARHGAP6O43182 974 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CCP110O43303 1012 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CALUO43852 315 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ATP9AO75110 1047 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 GCNT3O95395 438 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 GNA14O95837 355 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CCNE2O96020 404 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 MYBP10242 640 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 KCNA2P16389 499 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 GJA5P36382 358 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CASP5P51878 434 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ZNF131P52739 623 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ADKP55263 362 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 PSMC5P62195 406 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 RBL2Q08999 1139 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 STXBP2Q15833 593 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 EDRF1Q3B7T1 1238 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 FKBP15Q5T1M5 1219 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ZC3H3Q8IXZ2 948 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 CCAR2Q8N163 923 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 ZNF507Q8TCN5 953 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 BAG1Q99933 345 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 MOV10L1Q9BXT6 1211 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 KCTD10Q9H3F6 313 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 PARVGQ9HBI0 331 aa10.11□□□□□ -0.79
SMARCC1-208ENST00000492896 SPATA31C2B4DYI2 1134 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ZBTB39O15060 712 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 STX10O60499 249 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 PEX10O60683 326 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 HIP1RO75146 1068 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 EIF3JO75822 258 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 PRPF6O94906 941 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 GYPCP04921 128 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ERCC3P19447 782 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 YWHABP31946 246 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ICAM3P32942 547 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 RARRES1P49788 294 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 FKBP1BP68106 108 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 CNTN2Q02246 1040 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 TBC1D8BQ0IIM8 1120 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 UGCGQ16739 394 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 KNOP1Q1ED39 458 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 VWA3BQ502W6 1294 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 MIIPQ5JXC2 388 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 CEP135Q66GS9 1140 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 GPAT2Q6NUI2 795 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 TMEM139Q8IV31 216 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 MYCT1Q8N699 235 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ATP6V0A1Q93050 837 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 EEF2KMTQ96G04 330 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 MPHOSPH6Q99547 160 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 NUP58Q9BVL2 599 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 TIPINQ9BVW5 301 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 NAA15Q9BXJ9 866 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 JPH1Q9HDC5 661 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ANKEF1Q9NU02 776 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 TYW1Q9NV66 732 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 PCDHA10Q9Y5I2 948 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 SIP14410 1827 aa10.1□□□□□ -0.79
SMARCC1-208ENST00000492896 ASTN1O14525 1302 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 PDXKO00764 312 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 CETN3O15182 167 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 RGS20O76081 388 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 PSAPP07602 524 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 EDNRBP24530 442 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 CASP14P31944 242 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 FXR1P51114 621 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 MAPK7Q13164 816 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 SYCP1Q15431 976 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 FAM178BQ8IXR5 827 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 FAM133AQ8N9E0 248 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 RETREG2Q8NC44 543 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 CPLX3Q8WVH0 158 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 IQCDQ96DY2 449 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 C16orf45Q96MC5 204 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 MMP19Q99542 508 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 GBA2Q9HCG7 927 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 SLC9A2Q9UBY0 812 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
SMARCC1-208ENST00000492896 IGSF9BQ9UPX0 1349 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms