RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 MBLAC1A4D2B0 266 aaPredicted RBP16.65■□□□□ 0.26
SS18L1-205ENST00000492466 MGAT3Q09327 533 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 BLIDQ8IZY5 108 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 SEPT1Q8WYJ6 367 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 PCYT2Q99447 389 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 MXRA8Q9BRK3 442 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 COL4A6Q14031 1691 aa16.65■□□□□ 0.26
SS18L1-205ENST00000492466 TRIOO75962 3097 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 CCDC194A0A1B0GVG4 234 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 LINC00271P0C7V0 271 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 COL9A1P20849 921 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 EPC2Q52LR7 807 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 CEP55Q53EZ4 464 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 PLA2G4DQ86XP0 818 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
SS18L1-205ENST00000492466 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
SS18L1-205ENST00000492466 CYP2W1Q8TAV3 490 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 KIF2CQ99661 725 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.25
SS18L1-205ENST00000492466 RAPGEFL1Q9UHV5 662 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
SS18L1-205ENST00000492466 MAFGO15525 162 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 JAK2O60674 1132 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 SETQ01105 290 aaPredicted RBP16.63■□□□□ 0.25
SS18L1-205ENST00000492466 LPIN1Q14693 890 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 TAF2Q6P1X5 1199 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 FBXO22Q8NEZ5 403 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 APBB2Q92870 758 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 ERAP1Q9NZ08 941 aa16.63■□□□□ 0.25
SS18L1-205ENST00000492466 H3BNC9 293 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
SS18L1-205ENST00000492466 UPP2O95045 317 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 MARK3P27448 753 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
SS18L1-205ENST00000492466 GRIK4Q16099 956 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 KHSRPQ92945 711 aaKnown RBP eCLIP16.62■□□□□ 0.25
SS18L1-205ENST00000492466 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 YME1L1Q96TA2 773 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
SS18L1-205ENST00000492466 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
SS18L1-205ENST00000492466 CD320Q9NPF0 282 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 KCNH7Q9NS40 1196 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 MYO7AQ13402 2215 aa16.62■□□□□ 0.25
SS18L1-205ENST00000492466 GHRP10912 638 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 KRT2P35908 639 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 HMGN5P82970 282 aaKnown RBP16.61■□□□□ 0.25
SS18L1-205ENST00000492466 GNL2Q13823 731 aaKnown RBP16.61■□□□□ 0.25
SS18L1-205ENST00000492466 PRR16Q569H4 304 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 TBCKQ8TEA7 893 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 DNAJB3Q8WWF6 145 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 MRPL38Q96DV4 380 aaKnown RBP16.61■□□□□ 0.25
SS18L1-205ENST00000492466 SAMD11Q96NU1 681 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 UBE2ZQ9H832 354 aaPredicted RBP16.61■□□□□ 0.25
SS18L1-205ENST00000492466 SLC9A2Q9UBY0 812 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 TUBE1Q9UJT0 475 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
SS18L1-205ENST00000492466 MYH9P35579 1960 aaKnown RBP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 TTC3P53804 2025 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 ENPP3O14638 875 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 ADAMTS3O15072 1205 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 ARP10275 920 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 INSRRP14616 1297 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 ITGB3BPQ13352 177 aaPredicted RBP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 FBXO47Q5MNV8 452 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 NIPA1Q7RTP0 329 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 CRIPAKQ8N1N5 446 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 GLG1Q92896 1179 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
SS18L1-205ENST00000492466 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
SS18L1-205ENST00000492466 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 FAM86B1E9PN63 330 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 MEIS1O00470 390 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 ATG7O95352 703 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 CYP3A4P08684 503 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 FAM86B2P0C5J1 330 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 MCM2P49736 904 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 GPM6BQ13491 265 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 COL19A1Q14993 1142 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 INF2Q27J81 1249 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 LEXMQ3ZCV2 418 aa16.59■□□□□ 0.25
SS18L1-205ENST00000492466 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-205ENST00000492466 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms