RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 UCHL3P15374 230 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DHX9Q08211 1270 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GPATCH11Q8N954 259 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MRRFQ96E11 262 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CTTNBP2NLQ9P2B4 639 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TOGARAM1Q9Y4F4 1720 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 LRP6O75581 1613 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GBP6Q6ZN66 633 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ZNF571Q7Z3V5 609 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TRIM51Q9BSJ1 452 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FBXO28Q9NVF7 368 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TISP43B9A030 160 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM86B1E9PN63 330 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM86B2P0C5J1 330 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TMOD1P28289 359 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 STAT1P42224 750 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FXR2P51116 673 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 IFT88Q13099 833 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NSMFQ6X4W1 530 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NDUFB10O96000 172 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FGGP02679 453 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 AOC3Q16853 763 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FBXW10Q5XX13 1052 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MGARPQ8TDB4 240 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CAPN7Q9Y6W3 813 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TMEM150BA6NC51 233 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ATMINO43313 823 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FLOT1O75955 427 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 KNOP1Q1ED39 458 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CASKIN2Q8WXE0 1202 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DISP2A7MBM2 1401 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CALUO43852 315 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MESDQ14696 234 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SLC18A3Q16572 532 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TMOD2Q9NZR1 351 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FRMD4BQ9Y2L6 1034 aa16.59■□□□□ 0.25
TNFRSF1B-203ENST00000492361 AGPSO00116 658 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 EML1O00423 815 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PPFIA4O75335 1185 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 INPP5BP32019 993 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PLTPP55058 493 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PDIA5Q14554 519 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 BARGINQ6ZT62 677 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ACER1Q8TDN7 264 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM169AQ9Y6X4 670 aa16.58■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ARHGEF35A5YM69 484 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 TTI1O43156 1089 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 IFNAR2P48551 515 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 AADACL2Q6P093 401 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 EIF2AK1Q9BQI3 630 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 BMP3P12645 472 aa16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 NOVA2Q9UNW9 492 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1B-203ENST00000492361 HARSP12081 509 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 GCLMP48507 274 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 GLG1Q92896 1179 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 NOL4O94818 638 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 CALCAP01258 141 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 C2CD6Q53TS8 623 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 SYDE2Q5VT97 1194 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 PPM1KQ8N3J5 372 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 RNPC3Q96LT9 517 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 MLXIPLQ9NP71 852 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 SNX24Q9Y343 169 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 MYH3P11055 1940 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 ERLIN2O94905 339 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 SNX1Q13596 522 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 TRIP13Q15645 432 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 ARSHQ5FYA8 562 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 RC3H1Q5TC82 1133 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
TNFRSF1B-203ENST00000492361 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 K7ENM7 598 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 MYZAPP0CAP1 466 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 DRAP1Q14919 205 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 TAB3Q8N5C8 712 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 UBE2TQ9NPD8 197 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 NR1D1P20393 614 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 PSMD2Q13200 908 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 TTMPQ5BVD1 217 aa16.56■□□□□ 0.24
TNFRSF1B-203ENST00000492361 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms