RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 GET4Q7L5D6 327 aaPredicted RBP5.74□□□□□ -1.49
RTN4-215ENST00000491592 PPM1KQ8N3J5 372 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 IGSF22Q8N9C0 903 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 TEX19Q8NA77 164 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 UHMK1Q8TAS1 419 aaKnown RBP5.74□□□□□ -1.49
RTN4-215ENST00000491592 ARPC5LQ9BPX5 153 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 SLC6A20Q9NP91 592 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 SAMD15Q9P1V8 674 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 MYOTQ9UBF9 498 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PALD1Q9ULE6 856 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 LZTS1Q9Y250 596 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PCDHB4Q9Y5E5 795 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PHLDB1Q86UU1 1377 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 AQRO60306 1485 aaKnown RBP eCLIP5.74□□□□□ -1.491e-15■■■■□ 24.7
RTN4-215ENST00000491592 NCAPD3P42695 1498 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 A0A087X0B3 334 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 FAM83GA6ND36 823 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 ZNF561-AS1K7EIQ3 104 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 M0R2C6 588 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 HGSO14964 777 aaPredicted RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 GSTA4O15217 222 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 DHX16O60231 1041 aaKnown RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 MAFKO60675 156 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 KPNA6O60684 536 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 TSPAN15O95858 294 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 LDHCP07864 332 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 HSP90AB1P08238 724 aaKnown RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 COL6A2P12110 1019 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 MYCLP1P12525 358 aaPredicted RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 POLD1P28340 1107 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 VIPR1P32241 457 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 CASP2P42575 452 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 TRAPPC10P48553 1259 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 PRR5P85299 388 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 ZNF200P98182 395 aaPredicted RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 GPR19Q15760 415 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 SYCP2LQ5T4T6 812 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 C16orf59Q7L2K0 433 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 THNSL2Q86YJ6 484 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 PHOSPHO1Q8TCT1 267 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 SNRNP27Q8WVK2 155 aaKnown RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 ZNF552Q9H707 407 aaPredicted RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 ARNT2Q9HBZ2 717 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 CATSPERZQ9NTU4 200 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 FEZ2Q9UHY8 353 aaPredicted RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 NOL7Q9UMY1 257 aaKnown RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 THRAP3Q9Y2W1 955 aaKnown RBP5.73□□□□□ -1.49
RTN4-215ENST00000491592 CUX1P39880 1505 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 HFM1A2PYH4 1435 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 WASHC2CQ9Y4E1 1318 aa5.73□□□□□ -1.49
RTN4-215ENST00000491592 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 FYCO1Q9BQS8 1478 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 TBX3O15119 743 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 NKRFO15226 690 aaKnown RBP eCLIP5.72□□□□□ -1.49
RTN4-215ENST00000491592 TADA3O75528 432 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 ZBTB7AO95365 584 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 NPTXRO95502 500 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 PDE6AP16499 860 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 POU3F2P20265 443 aaPredicted RBP5.72□□□□□ -1.49
RTN4-215ENST00000491592 MASP1P48740 699 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 CRY1Q16526 586 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 TBC1D10BQ4KMP7 808 aaPredicted RBP5.72□□□□□ -1.49
RTN4-215ENST00000491592 FIGNQ5HY92 759 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 OVCH1Q7RTY7 1134 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 DDX1Q92499 740 aaKnown RBP5.72□□□□□ -1.49
RTN4-215ENST00000491592 ALG3Q92685 438 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 TSR2Q969E8 191 aaKnown RBP5.72□□□□□ -1.49
RTN4-215ENST00000491592 MCOLN1Q9GZU1 580 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 SMURF1Q9HCE7 757 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 DCP1AQ9NPI6 582 aaPredicted RBP5.72□□□□□ -1.49
RTN4-215ENST00000491592 ASH2LQ9UBL3 628 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 DSEQ9UL01 958 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 PLA2G2DQ9UNK4 145 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 SRPK3Q9UPE1 567 aa5.72□□□□□ -1.49
RTN4-215ENST00000491592 CCDC18Q5T9S5 1454 aa5.71□□□□□ -1.49
RTN4-215ENST00000491592 POLR1AO95602 1720 aaPredicted RBP5.71□□□□□ -1.49
RTN4-215ENST00000491592 EFCAB5A4FU69 1503 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 TCRBV5S4A2TA0A5A2 114 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 SLC27A2O14975 620 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 TSPAN6O43657 245 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 PEX10O60683 326 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 AMY2AP04746 511 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 KRT15P19012 456 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 AMY2BP19961 511 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 STAT3P40763 770 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 NEK4P51957 841 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 EPHB1P54762 984 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 SRSF3P84103 164 aaKnown RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 TMEM95Q3KNT9 176 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CFAP100Q494V2 611 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CDCA2Q69YH5 1023 aaPredicted RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 PKN3Q6P5Z2 889 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 ARHGAP36Q6ZRI8 547 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 UBE2R2Q712K3 238 aaPredicted RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 MILR1Q7Z6M3 343 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 RNF180Q86T96 592 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 ANKLE2Q86XL3 938 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms