RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 MRPL42Q9Y6G3 142 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 GCN1Q92616 2671 aaKnown RBP12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 PDE1AP54750 535 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 NLRX1Q86UT6 975 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 IL31RAQ8NI17 732 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 CDHR1Q96JP9 859 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 TUBE1Q9UJT0 475 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 PCDHB12Q9Y5F1 795 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
CLCNKA-206ENST00000491433 RRN3P2A6NIE6 340 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 B4E1Z4 1266 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 CLCN5P51795 746 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 PPFIA1Q13136 1202 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 IMMTQ16891 758 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 SUSD6Q92537 303 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 MFSD1Q9H3U5 465 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 BARX2Q9UMQ3 279 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 NR2E1Q9Y466 385 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 CDY2AQ9Y6F7 541 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 FRMPD4Q14CM0 1322 aa12.85□□□□□ -0.35
CLCNKA-206ENST00000491433 MBLAC1A4D2B0 266 aaPredicted RBP12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 GLP2RO95838 553 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 SCG2P13521 617 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 DNAJB1P25685 340 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 GRIK4Q16099 956 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 ODR4Q5SWX8 454 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 UBALD2Q8IYN6 164 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 CUL5Q93034 780 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 ASPMQ8IZT6 3477 aa12.84□□□□□ -0.35
CLCNKA-206ENST00000491433 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 PNMA6FA0A0J9YX94 578 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 CD52P31358 61 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 TCF7P36402 384 aaPredicted RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 TMEM184AQ6ZMB5 413 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 RUFY4Q6ZNE9 571 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 CRIPAKQ8N1N5 446 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 RTKNQ9BST9 563 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 RIOX1Q9H6W3 641 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
CLCNKA-206ENST00000491433 NAV2Q8IVL1 2488 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 HIP1O00291 1037 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 SP4Q02446 784 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PAK2Q13177 524 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 MTMR3Q13615 1198 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 DUSP6Q16828 381 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 DCLK2Q8N568 766 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 RASGRP4Q8TDF6 673 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 GLG1Q92896 1179 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PIGSQ96S52 555 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 DACH1Q9UI36 760 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
CLCNKA-206ENST00000491433 ERICH2A1L162 156 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 DCDC2BA2VCK2 349 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 MAFGO15525 162 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 SDSP20132 328 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 TRDNQ13061 729 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms