RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 MAFBQ9Y5Q3 323 aaPredicted RBP24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 A0A087WWV3 80 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 ZNF862O60290 1169 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 LGR5O75473 907 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 KANK3Q6NY19 840 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 AFAP1L1Q8TED9 768 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 CCDC34Q96HJ3 373 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 ABHD8Q96I13 439 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 NACC1Q96RE7 527 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 MTRQ99707 1265 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 KBTBD4Q9NVX7 518 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 EMSYQ7Z589 1322 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 DKC1O60832 514 aaKnown RBP eCLIP24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 MMP3P08254 477 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 RARBP10826 455 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 FAM160B1Q5W0V3 765 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 ELOA2Q8IYF1 753 aaPredicted RBP24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 GRAMD1CQ8IYS0 662 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 PAGE5Q96GU1 130 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 TMEM106CQ9BVX2 250 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 AZI2Q9H6S1 392 aa24.28■■□□□ 1.48
VCPKMT-204ENST00000491402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 A6NJR5 290 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 ZBTB39O15060 712 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 PPFIA4O75335 1185 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 HOXD8P13378 290 aaPredicted RBP24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 AFMP43652 599 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 STAT5BP51692 787 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 MCM6Q14566 821 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 SH3RF1Q7Z6J0 888 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 TRIM50Q86XT4 487 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 STAMQ92783 540 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 AP5M1Q9H0R1 490 aa24.27■■□□□ 1.48
VCPKMT-204ENST00000491402 MSCO60682 206 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 EYA4O95677 639 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 GJB1P08034 283 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 YWHABP31946 246 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 PRKCEQ02156 737 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 UTP14CQ5TAP6 766 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 GLG1Q92896 1179 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 BHMT2Q9H2M3 363 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 HOOK1Q9UJC3 728 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 ARID2Q68CP9 1835 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 CTAGE5O15320 804 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 LGALS2P05162 132 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 PLA2G4BP0C869 781 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 MDM2Q00987 491 aaPredicted RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 DHX8Q14562 1220 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 POSTNQ15063 836 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 DGKDQ16760 1214 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 SV2BQ7L1I2 683 aa24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 TRMT1LQ7Z2T5 733 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-204ENST00000491402 SYNRGQ9UMZ2 1314 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 PGK1P00558 417 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 ATP4AP20648 1035 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 CPT1AP50416 773 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 SLC12A3P55017 1021 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 IRX5P78411 483 aaPredicted RBP24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 PNOCQ13519 176 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 PLPPR4Q7Z2D5 763 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 U2AF1L4Q8WU68 220 aaKnown RBP24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 SMARCAD1Q9H4L7 1026 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 XPNPEP3Q9NQH7 507 aa24.25■■□□□ 1.47
VCPKMT-204ENST00000491402 FRMPD3Q5JV73 1810 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 STBD1O95210 358 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 SGPL1O95470 568 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 SSBP05455 408 aaKnown RBP eCLIP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 PRR29P0C7W0 189 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 XRCC6P12956 609 aaKnown RBP eCLIP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 GJA9P57773 515 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 ANO5Q75V66 913 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 CKAP2LQ8IYA6 745 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 SYT2Q8N9I0 419 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 ERCC4Q92889 916 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 DBR1Q9UK59 544 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 TMEM150BA6NC51 233 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 MYCNP04198 464 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 C6orf222P0C671 652 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 ZNF286BP0CG31 522 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 SLC26A2P50443 739 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 AMPD3Q01432 767 aa24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 FSCN1Q16658 493 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 BRDTQ58F21 947 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 RBM43Q6ZSC3 357 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 UPF3AQ9H1J1 476 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-204ENST00000491402 TFRCP02786 760 aaKnown RBP24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 OATP04181 439 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 MARK3P27448 753 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 CASP1P29466 404 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 RARRES1P49788 294 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 XKR3Q5GH77 459 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 C16orf70Q9BSU1 422 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 ANKEF1Q9NU02 776 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 ERAP1Q9NZ08 941 aa24.23■■□□□ 1.47
VCPKMT-204ENST00000491402 MYL1P05976 194 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 BEX3Q00994 111 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 ZSCAN23Q3MJ62 389 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 PLA2G4FQ68DD2 849 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 OTUD6AQ7L8S5 288 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms