RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
VARS-227ENST00000489979 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 RPGRIP1Q96KN7 1286 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 SNX27Q96L92 541 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 PCYT2Q99447 389 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
VARS-227ENST00000489979 TMX1Q9H3N1 280 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 TLE6Q9H808 572 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 UBIAD1Q9Y5Z9 338 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 IGSF9BQ9UPX0 1349 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 PER2O15055 1255 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
VARS-227ENST00000489979 UBE2SQ16763 222 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 ZNF654Q8IZM8 581 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 MICAL1Q8TDZ2 1067 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 TRAPPC12Q8WVT3 735 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 CELF4Q9BZC1 486 aaKnown RBP16.01■□□□□ 0.15
VARS-227ENST00000489979 JADE2Q9NQC1 790 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 PCDHA2Q9Y5H9 948 aa16.01■□□□□ 0.15
VARS-227ENST00000489979 FNDC1Q4ZHG4 1894 aaPredicted RBP16.01■□□□□ 0.15
VARS-227ENST00000489979 DDAH1O94760 285 aa16■□□□□ 0.15
VARS-227ENST00000489979 PLEKHA8P1O95397 391 aa16■□□□□ 0.15
VARS-227ENST00000489979 SMARCA1P28370 1054 aa16■□□□□ 0.15
VARS-227ENST00000489979 KIF5BP33176 963 aa16■□□□□ 0.15
VARS-227ENST00000489979 SIGLEC14Q08ET2 396 aa16■□□□□ 0.15
VARS-227ENST00000489979 PLCB4Q15147 1175 aa16■□□□□ 0.15
VARS-227ENST00000489979 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
VARS-227ENST00000489979 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
VARS-227ENST00000489979 MB21D2Q8IYB1 491 aaPredicted RBP16■□□□□ 0.15
VARS-227ENST00000489979 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
VARS-227ENST00000489979 SRBD1Q8N5C6 995 aaKnown RBP16■□□□□ 0.15
VARS-227ENST00000489979 LZTS2Q9BRK4 669 aa16■□□□□ 0.15
VARS-227ENST00000489979 AZI2Q9H6S1 392 aa16■□□□□ 0.15
VARS-227ENST00000489979 LY9Q9HBG7 655 aa16■□□□□ 0.15
VARS-227ENST00000489979 JPH1Q9HDC5 661 aaPredicted RBP16■□□□□ 0.15
VARS-227ENST00000489979 SLC9A2Q9UBY0 812 aa16■□□□□ 0.15
VARS-227ENST00000489979 PCDHB7Q9Y5E2 793 aa16■□□□□ 0.15
VARS-227ENST00000489979 PCDHB12Q9Y5F1 795 aa16■□□□□ 0.15
VARS-227ENST00000489979 CACNA1HO95180 2353 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 MAFGO15525 162 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 ST18O60284 1047 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
VARS-227ENST00000489979 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
VARS-227ENST00000489979 VCPP55072 806 aaKnown RBP15.99■□□□□ 0.15
VARS-227ENST00000489979 UBE3AQ05086 875 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 NFX1Q12986 1120 aaKnown RBP15.99■□□□□ 0.15
VARS-227ENST00000489979 VN1R2Q8NFZ6 395 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 ATP8B4Q8TF62 1192 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 SUSD6Q92537 303 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
VARS-227ENST00000489979 TLR9Q9NR96 1032 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 FAM86C1Q9NVL1 165 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 PCDHA6Q9UN73 950 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 PCDHA8Q9Y5H6 950 aa15.99■□□□□ 0.15
VARS-227ENST00000489979 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 SMIM35A0A1B0GVV1 85 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 SPDYE3A6NKU9 549 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 TBKBP1A7MCY6 615 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 MGEA5O60502 916 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
VARS-227ENST00000489979 GNAQP50148 359 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 KRT76Q01546 638 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 DUSP6Q16828 381 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 NME8Q8N427 588 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 RUFY2Q8WXA3 655 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 ASIC4Q96FT7 647 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 AAASQ9NRG9 546 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 GINS2Q9Y248 185 aa15.98■□□□□ 0.15
VARS-227ENST00000489979 CFAP54Q96N23 3096 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 FGF18O76093 207 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 RXRAP19793 462 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 STAT5BP51692 787 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 ERVFC1P60507 584 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 ACTR2P61160 394 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 FAM102BQ5T8I3 360 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 TTC22Q5TAA0 569 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 MTHFD1LQ6UB35 978 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 PLPPR4Q7Z2D5 763 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
VARS-227ENST00000489979 ERVK-5Q9HDB9 667 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 KCNH7Q9NS40 1196 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 HCSTQ9UBK5 93 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 EVPLQ92817 2033 aa15.97■□□□□ 0.15
VARS-227ENST00000489979 FSCN2O14926 492 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 GFRA3O60609 400 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 RPS6KA5O75582 802 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 CHMLP26374 656 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 AVPR2P30518 371 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 CASC1Q6TDU7 716 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 NFXL1Q6ZNB6 911 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 THNSL1Q8IYQ7 743 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 COLGALT1Q8NBJ5 622 aa15.96■□□□□ 0.15
VARS-227ENST00000489979 ATOH1Q92858 354 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms