RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
VPS13D-210ENST00000489961 ATP6V1DQ9Y5K8 247 aa12.2□□□□□ -0.46
VPS13D-210ENST00000489961 VWA3AA6NCI4 1184 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 ZNF862O60290 1169 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 HOXC8P31273 242 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 IGBP1P78318 339 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 CTTNQ14247 550 aaKnown RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 STK38Q15208 465 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 PTPAQ15257 358 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 TRMT1LQ7Z2T5 733 aaKnown RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 TPH2Q8IWU9 490 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 C4orf19Q8IY42 314 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 CCDC155Q8N6L0 562 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 PDLIM7Q9NR12 457 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 RGL1Q9NZL6 768 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 TFIP11Q9UBB9 837 aaKnown RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
VPS13D-210ENST00000489961 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
VPS13D-210ENST00000489961 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 KIAA0355O15063 1070 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 TREHO43280 583 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 SLITRK3O94933 977 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 YEATS4O95619 227 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 CYP2C9P11712 490 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 DDIT3P35638 169 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 ADAM17P78536 824 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 ZNF200P98182 395 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 PTK7Q13308 1070 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 BFSP2Q13515 415 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 HIC1Q14526 733 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 IL17AQ16552 155 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 KRT79Q5XKE5 535 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 OTUD6AQ7L8S5 288 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 SERINC5Q86VE9 423 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 AK8Q96MA6 479 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
VPS13D-210ENST00000489961 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
VPS13D-210ENST00000489961 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 TRIM43BA6NCK2 446 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 LYPLA2O95372 231 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 RAG1P15918 1043 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 SYN1P17600 705 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 MUTP22033 750 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 KLRC1P26715 233 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 RPA1P27694 616 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 KRT85P78386 507 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 MTERF2Q49AM1 385 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 TAF2Q6P1X5 1199 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 LINC00301Q8NCQ3 95 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 TRAPPC12Q8WVT3 735 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 CCDC43Q96MW1 224 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 HIPK3Q9H422 1215 aa12.17□□□□□ -0.46
VPS13D-210ENST00000489961 SRPRBQ9Y5M8 271 aaKnown RBP12.17□□□□□ -0.46
VPS13D-210ENST00000489961 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 ARID2Q68CP9 1835 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 KDM3AQ9Y4C1 1321 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 LOXHD1Q8IVV2 1947 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 SPTLC2O15270 562 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 MAGEB2O15479 319 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 MED24O75448 989 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 STBD1O95210 358 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 TIMP1P01033 207 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 RPLP2P05387 115 aaKnown RBP12.16□□□□□ -0.46
VPS13D-210ENST00000489961 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
VPS13D-210ENST00000489961 YWHABP31946 246 aaKnown RBP12.16□□□□□ -0.46
VPS13D-210ENST00000489961 TBC1D8BQ0IIM8 1120 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 ANO5Q75V66 913 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 EXOC8Q8IYI6 725 aa12.16□□□□□ -0.46
VPS13D-210ENST00000489961 KRI1Q8N9T8 703 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms