RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SLC26A4O43511 780 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 UBA7P41226 1012 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 GRB10Q13322 594 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 TMEM119Q4V9L6 283 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 PRPF38BQ5VTL8 546 aaKnown RBP18.03■□□□□ 0.48
CLIC4-203ENST00000489758 RESP18Q5W5W9 173 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 POTEGQ6S5H5 508 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 ATP8B4Q8TF62 1192 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 GLT1D1Q96MS3 346 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 KATNAL1Q9BW62 490 aa18.03■□□□□ 0.48
CLIC4-203ENST00000489758 A0A1W2PQ27 194 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 A0A1W2PQ64 194 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 A0A1W2PQD8 194 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 ZBTB39O15060 712 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 OATP04181 439 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 MUTP22033 750 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 CMA1P23946 247 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 NBPF20Q3BBV1 942 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 ANO5Q75V66 913 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 SLC43A3Q8NBI5 491 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 LRRC15Q8TF66 581 aa18.02■□□□□ 0.48
CLIC4-203ENST00000489758 KDM3AQ9Y4C1 1321 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 A0A087WWV3 80 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 A0A087X0B3 334 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 TMEM150BA6NC51 233 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 DKC1O60832 514 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 SMIM10L2AP0DMW4 78 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 SMIM10L2BP0DMW5 78 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 HOXC8P31273 242 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 HIC1Q14526 733 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 XKR3Q5GH77 459 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 KCNK18Q7Z418 384 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 PAWRQ96IZ0 340 aaKnown RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 FAM167AQ96KS9 214 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 NIFKQ9BYG3 293 aaKnown RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 SENP6Q9GZR1 1112 aaPredicted RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 STARD7Q9NQZ5 370 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
CLIC4-203ENST00000489758 KIAA1024Q9UPX6 916 aa18.01■□□□□ 0.47
CLIC4-203ENST00000489758 FAM237AA0A1B0GTK4 181 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 YWHABP31946 246 aaKnown RBP18■□□□□ 0.47
CLIC4-203ENST00000489758 CHMP4BP1P59074 171 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 ITGA7Q13683 1181 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 TARBP2Q15633 366 aaKnown RBP18■□□□□ 0.47
CLIC4-203ENST00000489758 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 SESTD1Q86VW0 696 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 GBP4Q96PP9 640 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 CEP89Q96ST8 783 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 PLIN2Q99541 437 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 C11orf49Q9H6J7 331 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 TRPC6Q9Y210 931 aa18■□□□□ 0.47
CLIC4-203ENST00000489758 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 DDX11L8A8MPP1 907 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 HBP1O60381 514 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 GADD45BO75293 160 aaPredicted RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 INSRRP14616 1297 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 PLCG1P19174 1290 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 TXLNAP40222 546 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 CDK7P50613 346 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 SNX17Q15036 470 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 NAALADL2Q58DX5 795 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 MARCH8Q5T0T0 291 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 PLA2G4FQ68DD2 849 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 TRMT1LQ7Z2T5 733 aaKnown RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 KCTD17Q8N5Z5 321 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 VTI1AQ96AJ9 217 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 NACC1Q96RE7 527 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 NRBP2Q9NSY0 501 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 ANKEF1Q9NU02 776 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 SEPT9Q9UHD8 586 aaPredicted RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
CLIC4-203ENST00000489758 HPSEQ9Y251 543 aa17.99■□□□□ 0.47
CLIC4-203ENST00000489758 A0A1B0GVL5 298 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 ARVCFO00192 962 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 PFKFB1P16118 471 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 NPEPPSP55786 919 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 ADAM17P78536 824 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 PPFIA1Q13136 1202 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 GRIK4Q16099 956 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 E2F4Q16254 413 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 NECAB2Q7Z6G3 386 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 C7orf31Q8N865 590 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 LMBR1Q8WVP7 490 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 TRAPPC12Q8WVT3 735 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 CDK5RAP3Q96JB5 506 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 BLOC1S4Q9NUP1 217 aa17.98■□□□□ 0.47
CLIC4-203ENST00000489758 SETD4Q9NVD3 440 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms