RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 NSMFQ6X4W1 530 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 KRT25Q7Z3Z0 450 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 CCDC144CPQ8IYA2 1237 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 Q8N3U1 123 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 DEFB123Q8N688 67 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 CNNM2Q9H8M5 875 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 IL17RBQ9NRM6 502 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 LTBP2Q14767 1821 aa10.34□□□□□ -0.75
TNRC6B-208ENST00000489500 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 NMT2O60551 498 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 ADAMTS4O75173 837 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 SELPP16109 830 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 TAL1P17542 331 aaPredicted RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 CST5P28325 142 aaPredicted RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 GJA9P57773 515 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 HAND2P61296 217 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 C11orf91Q3C1V1 193 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 NKAPLQ5M9Q1 402 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 BTNL9Q6UXG8 535 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 DGKHQ86XP1 1220 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 FAM133AQ8N9E0 248 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 KRT23Q9C075 422 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 MAF1Q9H063 256 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 RANBP17Q9H2T7 1088 aaKnown RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 KAT14Q9H8E8 782 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 VTA1Q9NP79 307 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 A1CFQ9NQ94 594 aaKnown RBP10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 LRFN2Q9ULH4 789 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 USP20Q9Y2K6 914 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 RAD50Q92878 1312 aa10.33□□□□□ -0.76
TNRC6B-208ENST00000489500 PTPDC1A2A3K4 754 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 ASGR1P07306 291 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 EPB42P16452 691 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 NOVP48745 357 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 ARSDP51689 593 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 FPGSQ05932 587 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 TRDNQ13061 729 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 FAM109BQ6ICB4 259 aaPredicted RBP10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 FAM35AQ86V20 835 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 KLHDC9Q8NEP7 349 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 BADQ92934 168 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 IFT43Q96FT9 208 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 MYO19Q96H55 970 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 NACC1Q96RE7 527 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 DSCC1Q9BVC3 393 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 UPF3AQ9H1J1 476 aaKnown RBP10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 INCENPQ9NQS7 918 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 PDLIM7Q9NR12 457 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 CYP39A1Q9NYL5 469 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 Q9Y3F1 56 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 ZNF536O15090 1300 aa10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 FRMPD2Q68DX3 1309 aaPredicted RBP10.32□□□□□ -0.76
TNRC6B-208ENST00000489500 ARVCFO00192 962 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 OPLAHO14841 1288 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 DHX16O60231 1041 aaKnown RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 RGS9O75916 674 aaPredicted RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 SASH3O75995 380 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 MAP3K6O95382 1288 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 PDHBP11177 359 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 CPB1P15086 417 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 CNTN2Q02246 1040 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 PLAURQ03405 335 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 TRAF1Q13077 416 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 PPIGQ13427 754 aaKnown RBP eCLIP10.31□□□□□ -0.763e-9■□□□□ 9
TNRC6B-208ENST00000489500 RNF207Q6ZRF8 634 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 KIAA1211Q6ZU35 1233 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 ANKRD33Q7Z3H0 272 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 ZNF589Q86UQ0 364 aaPredicted RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 DMRTC2Q8IXT2 367 aaPredicted RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 TMEM199Q8N511 208 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 UBAC1Q9BSL1 405 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 MTIF3Q9H2K0 278 aaKnown RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 NOVA2Q9UNW9 492 aaKnown RBP10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
TNRC6B-208ENST00000489500 ERICH2A1L162 156 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 NKRFO15226 690 aaKnown RBP eCLIP10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 FOXP2O15409 715 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 IGHDP01880 384 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 SLC16A2P36021 539 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 ZNF543Q08ER8 600 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 BAATQ14032 418 aaPredicted RBP10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 TLK2Q86UE8 772 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms