RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 GJB2P29033 226 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 HOXC8P31273 242 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 FXR1P51114 621 aaKnown RBP eCLIP10.53□□□□□ -0.72
LCN2-205ENST00000487719 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
LCN2-205ENST00000487719 ST3GAL1Q11201 340 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 CNKSR3Q6P9H4 555 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 OTOP2Q7RTS6 562 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 NOSTRINQ8IVI9 506 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
LCN2-205ENST00000487719 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 HERVK_113Q902F9 699 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
LCN2-205ENST00000487719 IGSF9BQ9UPX0 1349 aa10.53□□□□□ -0.72
LCN2-205ENST00000487719 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 KIF28PB7ZC32 967 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 MAGEB2O15479 319 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 SLC37A4O43826 429 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 DTNBO60941 627 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 OATP04181 439 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 CTSHP09668 335 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PSMC5P62195 406 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 PRKCEQ02156 737 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 IKBKEQ14164 716 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 RAB30Q15771 203 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 ODR4Q5SWX8 454 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 ZNF618Q5T7W0 954 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 TRMT1LQ7Z2T5 733 aaKnown RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 POTEDQ86YR6 584 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 NME8Q8N427 588 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 NEK9Q8TD19 979 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 SEPT8Q92599 483 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 DHX38Q92620 1227 aaKnown RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 APBB2Q92870 758 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 SLC9A7Q96T83 725 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PCYT2Q99447 389 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 KCNMB3Q9NPA1 279 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 SEPT9Q9UHD8 586 aaPredicted RBP10.52□□□□□ -0.73
LCN2-205ENST00000487719 MSRAQ9UJ68 235 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PCDHA12Q9UN75 941 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PCDHA2Q9Y5H9 948 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 NLRC5Q86WI3 1866 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
LCN2-205ENST00000487719 LAMA2P24043 3122 aaKnown RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 MCM7P33993 719 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 QARSP47897 775 aaKnown RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 DNM2P50570 870 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 EPHB4P54760 987 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 MRPS6P82932 125 aaKnown RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 TBC1D8BQ0IIM8 1120 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 XKR3Q5GH77 459 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 TTC38Q5R3I4 469 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 MTHFD1LQ6UB35 978 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 OTUD6AQ7L8S5 288 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 RPAINQ86UA6 219 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 METTL13Q8N6R0 699 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 ERMNQ8TAM6 284 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 SCLT1Q96NL6 688 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 CTAGE1Q96RT6 745 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 FAM49AQ9H0Q0 323 aaPredicted RBP10.51□□□□□ -0.73
LCN2-205ENST00000487719 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 TELO2Q9Y4R8 837 aa10.51□□□□□ -0.73
LCN2-205ENST00000487719 TTC3P53804 2025 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 TMEM265A0A087WTH1 108 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 SMIM35A0A1B0GVV1 85 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 FAM205CA6NFA0 338 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 K7ELQ4 463 aaPredicted RBP10.5□□□□□ -0.73
LCN2-205ENST00000487719 CXCL10P02778 98 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 ATP2A2P16615 1042 aaKnown RBP10.5□□□□□ -0.73
LCN2-205ENST00000487719 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.73
LCN2-205ENST00000487719 KLRC1P26715 233 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 TXKP42681 527 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 ADAM17P78536 824 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 EPHA7Q15375 998 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 TRIM71Q2Q1W2 868 aaKnown RBP10.5□□□□□ -0.73
LCN2-205ENST00000487719 RILPL1Q5EBL4 403 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 EARS2Q5JPH6 523 aaKnown RBP10.5□□□□□ -0.73
LCN2-205ENST00000487719 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
LCN2-205ENST00000487719 PHOSPHO2Q8TCD6 241 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
LCN2-205ENST00000487719 ZBED2Q9BTP6 218 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms