RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 RSPH10BP0C881 870 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 SFNP31947 248 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 RFC2P35250 354 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 ZNF174Q15697 407 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 TCTN1Q2MV58 587 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 FAM109BQ6ICB4 259 aaPredicted RBP22.31■■□□□ 1.16
LIMK1-206ENST00000486361 HERVK_113Q902F9 699 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 FAM49AQ9H0Q0 323 aaPredicted RBP22.31■■□□□ 1.16
LIMK1-206ENST00000486361 KIF3AQ9Y496 699 aa22.31■■□□□ 1.16
LIMK1-206ENST00000486361 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.31■■□□□ 1.16
LIMK1-206ENST00000486361 KAT6AQ92794 2004 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 ZBBXA8MT70 800 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 GRXCR1A8MXD5 290 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 TBX3O15119 743 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 BAG4O95429 457 aaKnown RBP22.3■■□□□ 1.16
LIMK1-206ENST00000486361 KLRC1P26715 233 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 MCM7P33993 719 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 CUL4AQ13619 759 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 CALCRLQ16602 461 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 MTHFD1LQ6UB35 978 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 NOSTRINQ8IVI9 506 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 BANK1Q8NDB2 785 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 TNPO1Q92973 898 aaKnown RBP22.3■■□□□ 1.16
LIMK1-206ENST00000486361 TMEM60Q9H2L4 133 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 IGSF9BQ9UPX0 1349 aa22.3■■□□□ 1.16
LIMK1-206ENST00000486361 ZBTB42B2RXF5 422 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 TXKP42681 527 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 PPP2R5CQ13362 524 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 NBR1Q14596 966 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 RASIP1Q5U651 963 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 BBXQ8WY36 941 aaPredicted RBP22.29■■□□□ 1.16
LIMK1-206ENST00000486361 FOXD4L1Q9NU39 408 aa22.29■■□□□ 1.16
LIMK1-206ENST00000486361 H3BQV1 296 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 NEMFO60524 1076 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 PFKMP08237 780 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 U2AF2P26368 475 aaKnown RBP eCLIP22.28■■□□□ 1.16
LIMK1-206ENST00000486361 PRKCEQ02156 737 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 TMEM62Q0P6H9 643 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 ZNF484Q5JVG2 852 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 LARP1BQ659C4 914 aaKnown RBP22.28■■□□□ 1.16
LIMK1-206ENST00000486361 TAF2Q6P1X5 1199 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 RDM1Q8NG50 284 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 PCDHA2Q9Y5H9 948 aa22.28■■□□□ 1.16
LIMK1-206ENST00000486361 TET1Q8NFU7 2136 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 TMEM150BA6NC51 233 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 CHRNA1P02708 482 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 CXCL10P02778 98 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 OATP04181 439 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 SLFN12Q8IYM2 578 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 MTMR9Q96QG7 549 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 SH2D3AQ9BRG2 576 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 NRBP2Q9NSY0 501 aa22.27■■□□□ 1.16
LIMK1-206ENST00000486361 TANC1Q9C0D5 1861 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
LIMK1-206ENST00000486361 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.26■■□□□ 1.15
LIMK1-206ENST00000486361 STBD1O95210 358 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 ACTN1P12814 892 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 TOB1P50616 345 aaPredicted RBP22.26■■□□□ 1.15
LIMK1-206ENST00000486361 SPIRE1Q08AE8 756 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 TTC38Q5R3I4 469 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 RSPH3Q86UC2 560 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 TTC12Q9H892 705 aaPredicted RBP22.26■■□□□ 1.15
LIMK1-206ENST00000486361 PCDHA12Q9UN75 941 aa22.26■■□□□ 1.15
LIMK1-206ENST00000486361 COL1A2P08123 1366 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 DDX11L8A8MPP1 907 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 K7ELQ4 463 aaPredicted RBP22.25■■□□□ 1.15
LIMK1-206ENST00000486361 CAND2O75155 1236 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 PARNO95453 639 aaKnown RBP22.25■■□□□ 1.15
LIMK1-206ENST00000486361 EPHA7Q15375 998 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 FAM26DQ5JW98 314 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 RPAINQ86UA6 219 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 DBF4BQ8NFT6 615 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 DYDC2Q96IM9 177 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 FAM167AQ96KS9 214 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 RGL1Q9NZL6 768 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 WRAP73Q9P2S5 460 aaPredicted RBP22.25■■□□□ 1.15
LIMK1-206ENST00000486361 NOL7Q9UMY1 257 aaKnown RBP22.25■■□□□ 1.15
LIMK1-206ENST00000486361 CDY2AQ9Y6F7 541 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 SLC4A7Q9Y6M7 1214 aa22.25■■□□□ 1.15
LIMK1-206ENST00000486361 SMIM35A0A1B0GVV1 85 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 C22orf31O95567 290 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 PBX2P40425 430 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 PSMC5P62195 406 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 MRPS6P82932 125 aaKnown RBP22.24■■□□□ 1.15
LIMK1-206ENST00000486361 MGAT3Q09327 533 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 CTTNQ14247 550 aaKnown RBP22.24■■□□□ 1.15
LIMK1-206ENST00000486361 CNKSR3Q6P9H4 555 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 Q7L0L9 218 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 KIAA0319LQ8IZA0 1049 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 METTL13Q8N6R0 699 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 PPP1R16BQ96T49 567 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 MTIF3Q9H2K0 278 aaKnown RBP22.24■■□□□ 1.15
LIMK1-206ENST00000486361 SEPT9Q9UHD8 586 aaPredicted RBP22.24■■□□□ 1.15
LIMK1-206ENST00000486361 PCDHB6Q9Y5E3 794 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 MYH9P35579 1960 aaKnown RBP22.24■■□□□ 1.15
LIMK1-206ENST00000486361 LAMA3Q16787 3333 aa22.24■■□□□ 1.15
LIMK1-206ENST00000486361 P4HBP07237 508 aaKnown RBP22.23■■□□□ 1.15
LIMK1-206ENST00000486361 GHRP10912 638 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms