RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 RTN4RL1Q86UN2 441 aaPredicted RBP13.24□□□□□ -0.29
MDH1-213ENST00000485781 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 GPRASP2Q96D09 838 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 ASIC4Q96FT7 647 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
MDH1-213ENST00000485781 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 KMT2EQ8IZD2 1858 aa13.24□□□□□ -0.29
MDH1-213ENST00000485781 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 CYTH3O43739 400 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
MDH1-213ENST00000485781 GATMP50440 423 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 NUBP1P53384 320 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
MDH1-213ENST00000485781 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
MDH1-213ENST00000485781 SLC35G1Q2M3R5 365 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
MDH1-213ENST00000485781 SPTBN4Q9H254 2564 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 TBKBP1A7MCY6 615 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 ATP9AO75110 1047 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 FGF18O76093 207 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 INSRRP14616 1297 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 KCNA2P16389 499 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 TECP42680 631 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 SARSP49591 514 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 WTAPQ15007 396 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 DUSP6Q16828 381 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 MARCH8Q5T0T0 291 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 SUSD6Q92537 303 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 RIPOR3Q96MK2 946 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 CELF4Q9BZC1 486 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
MDH1-213ENST00000485781 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
MDH1-213ENST00000485781 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 IGSF9BQ9UPX0 1349 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 KRT76Q01546 638 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 MTMR1Q13613 665 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 ODR4Q5SWX8 454 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 ATP8B4Q8TF62 1192 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 ENTPD7Q9NQZ7 604 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
MDH1-213ENST00000485781 GINS2Q9Y248 185 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
MDH1-213ENST00000485781 CFAP54Q96N23 3096 aa13.21□□□□□ -0.3
MDH1-213ENST00000485781 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.3
MDH1-213ENST00000485781 FAM186AA6NE01 2351 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 ERVFC1P60507 584 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 ANKRD54Q6NXT1 300 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 KREMEN2Q8NCW0 462 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
MDH1-213ENST00000485781 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
MDH1-213ENST00000485781 USP34Q70CQ2 3546 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 MEIS2O14770 477 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 HOXB8P17481 243 aaPredicted RBP13.19□□□□□ -0.3
MDH1-213ENST00000485781 LAG3P18627 525 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 PDE4AP27815 886 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 NUCB1Q02818 461 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 TROAPQ12815 778 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 UBALD2Q8IYN6 164 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 NME8Q8N427 588 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
MDH1-213ENST00000485781 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 ADAM2Q99965 735 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 JPH1Q9HDC5 661 aaPredicted RBP13.19□□□□□ -0.3
MDH1-213ENST00000485781 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
MDH1-213ENST00000485781 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
MDH1-213ENST00000485781 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
MDH1-213ENST00000485781 KDM3AQ9Y4C1 1321 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms