RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 PCDHGA4Q9Y5G9 962 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ASPMQ8IZT6 3477 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 PALM3A6NDB9 673 aaPredicted RBP7.4□□□□□ -1.22
CAPN13-206ENST00000485248 DDX11L8A8MPP1 907 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 FGF18O76093 207 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 SEC24BO95487 1268 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 F2P00734 622 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 RETP07949 1114 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 WEE2P0C1S8 567 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 SLC1A4P43007 532 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 MAGEA9P43362 315 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 KRT17Q04695 432 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 FOXC1Q12948 553 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 BAATQ14032 418 aaPredicted RBP7.4□□□□□ -1.22
CAPN13-206ENST00000485248 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
CAPN13-206ENST00000485248 LPAL2Q16609 132 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 MUM1L1Q5H9M0 696 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 C20orf194Q5TEA3 1177 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 SLFN13Q68D06 897 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 RNF207Q6ZRF8 634 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 RSPH3Q86UC2 560 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 LURAP1LQ8IV03 231 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 PJA1Q8NG27 643 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 KAT2BQ92831 832 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 RIOK1Q9BRS2 568 aaKnown RBP7.4□□□□□ -1.22
CAPN13-206ENST00000485248 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
CAPN13-206ENST00000485248 ZNF287Q9HBT7 754 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 ATP8A2Q9NTI2 1148 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 SEMA4GQ9NTN9 838 aa7.4□□□□□ -1.22
CAPN13-206ENST00000485248 MIA3Q5JRA6 1907 aa7.4□□□□□ -1.23
CAPN13-206ENST00000485248 COL4A3Q01955 1670 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 TREHO43280 583 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 GHRP10912 638 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 GBP2P32456 591 aaPredicted RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 RARSP54136 660 aaKnown RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 NRLP54845 237 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 EVX2Q03828 476 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 C19orf57Q0VDD7 668 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 LAMC2Q13753 1193 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 SMC1AQ14683 1233 aaKnown RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 CSRP2Q16527 193 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 DCLRE1AQ6PJP8 1040 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 STAG1Q8WVM7 1258 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 STAMQ92783 540 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 ZDHHC16Q969W1 377 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 ZNF512BQ96KM6 892 aaPredicted RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 PURBQ96QR8 312 aaKnown RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 MYL10Q9BUA6 226 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 FTHL17Q9BXU8 183 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 FAM126AQ9BYI3 521 aaPredicted RBP7.39□□□□□ -1.23
CAPN13-206ENST00000485248 ALG2Q9H553 416 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 CDH22Q9UJ99 828 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 HCFC2Q9Y5Z7 792 aa7.39□□□□□ -1.23
CAPN13-206ENST00000485248 CCDC171Q6TFL3 1326 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 POTEMA6NI47 508 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 NCAM2O15394 837 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 NARSO43776 548 aaKnown RBP7.38□□□□□ -1.23
CAPN13-206ENST00000485248 TTLL1O95922 423 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 SRFP11831 508 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 ERVFC1P60507 584 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 UBXN2BQ14CS0 331 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 LY6KQ17RY6 165 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 SOWAHCQ53LP3 525 aaPredicted RBP7.38□□□□□ -1.23
CAPN13-206ENST00000485248 TNNI3KQ59H18 835 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 POTEGQ6S5H5 508 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 PDZD3Q86UT5 571 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 CABP7Q86V35 215 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 WDR63Q8IWG1 891 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 ZBTB44Q8NCP5 570 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 GMCL1P1Q8NEA9 526 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 PPTC7Q8NI37 304 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 MRPS27Q92552 414 aaKnown RBP7.38□□□□□ -1.23
CAPN13-206ENST00000485248 UCN2Q96RP3 112 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 DBNDD2Q9BQY9 259 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 PNMA2Q9UL42 364 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 LZTS1Q9Y250 596 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 MRVI1Q9Y6F6 885 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 FPGT-TNNI3KV9GXZ4 949 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 LCTP09848 1927 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 WDR87Q6ZQQ6 2873 aa7.38□□□□□ -1.23
CAPN13-206ENST00000485248 BAZ2AQ9UIF9 1905 aaKnown RBP7.37□□□□□ -1.23
CAPN13-206ENST00000485248 M0QZ92 97 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 ENPP3O14638 875 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 KCNK5O95279 499 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 ATG7O95352 703 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 ARIH2O95376 493 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 ICAM1P05362 532 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 LAG3P18627 525 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 TGM1P22735 817 aa7.37□□□□□ -1.23
CAPN13-206ENST00000485248 PPM1AP35813 382 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms