RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 KCND1Q9NSA2 647 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 GPRC5BQ9NZH0 403 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 ZFP69BQ9UJL9 534 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 PRKAB1Q9Y478 270 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 MRPL42Q9Y6G3 142 aaKnown RBP5.55□□□□□ -1.52
VPS8-223ENST00000485024 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 PPP1R12AO14974 1030 aaPredicted RBP5.54□□□□□ -1.52
VPS8-223ENST00000485024 PPM1BO75688 479 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 DDAH1O94760 285 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 GCP02774 474 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 NAT2P11245 290 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
VPS8-223ENST00000485024 CHRNA2Q15822 529 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 MTERF2Q49AM1 385 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 VASNQ6EMK4 673 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 HOMER1Q86YM7 354 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 SYNPOQ8N3V7 929 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 STPG3Q8N7X2 389 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 RCC1LQ96I51 464 aaKnown RBP5.54□□□□□ -1.52
VPS8-223ENST00000485024 EPN3Q9H201 632 aa5.54□□□□□ -1.52
VPS8-223ENST00000485024 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS8-223ENST00000485024 TIMM13Q9Y5L4 95 aaPredicted RBP5.54□□□□□ -1.52
VPS8-223ENST00000485024 ARAP1Q96P48 1450 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 CDC45O75419 566 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 FBXO21O94952 628 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 SLC25A3Q00325 362 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 CYP4F3Q08477 520 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
VPS8-223ENST00000485024 EEPD1Q7L9B9 569 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 CELF2-AS1Q8N7Q2 184 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 RNPC3Q96LT9 517 aaKnown RBP5.53□□□□□ -1.52
VPS8-223ENST00000485024 CARD11Q9BXL7 1154 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 BRINP2Q9C0B6 783 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 RIOX1Q9H6W3 641 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 PARPBPQ9NWS1 579 aa5.53□□□□□ -1.52
VPS8-223ENST00000485024 A0A1W2PQH9 124 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 IQCA1LA6NCM1 817 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 PROB1E7EW31 1015 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 PEX11BO96011 259 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 GLRBP48167 497 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 SKIDA1Q1XH10 827 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
VPS8-223ENST00000485024 FAM178BQ8IXR5 827 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
VPS8-223ENST00000485024 SH3TC2Q8TF17 1288 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 THAP3Q8WTV1 239 aaPredicted RBP5.52□□□□□ -1.53
VPS8-223ENST00000485024 FRS2Q8WU20 508 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 TMEM169Q96HH4 297 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 DNAJC7Q99615 494 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 ST7Q9NRC1 585 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 MYOTQ9UBF9 498 aa5.52□□□□□ -1.53
VPS8-223ENST00000485024 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
VPS8-223ENST00000485024 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 AGRPO00253 132 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 ARNTLO00327 626 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 GJB6O95452 261 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 CKMP06732 381 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 LONRF2Q1L5Z9 754 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 GNPTABQ3T906 1256 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 CCDC103Q8IW40 242 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 NPLOC4Q8TAT6 608 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 ZNHIT2Q9UHR6 403 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 PCDHB10Q9UN67 800 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 GIT1Q9Y2X7 761 aa5.51□□□□□ -1.53
VPS8-223ENST00000485024 CCDC163A0A0D9SF12 145 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 RPS19P39019 145 aaKnown RBP5.5□□□□□ -1.53
VPS8-223ENST00000485024 ZNF143P52747 638 aaPredicted RBP5.5□□□□□ -1.53
VPS8-223ENST00000485024 PCOLCEQ15113 449 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 VHLLQ6RSH7 139 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 LRRC47Q8N1G4 583 aaKnown RBP5.5□□□□□ -1.53
VPS8-223ENST00000485024 CFHR4Q92496 578 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 C12orf65Q9H3J6 166 aaKnown RBP5.5□□□□□ -1.53
VPS8-223ENST00000485024 SPC25Q9HBM1 224 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 PLA2G3Q9NZ20 509 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 NR2E1Q9Y466 385 aa5.5□□□□□ -1.53
VPS8-223ENST00000485024 hCG_2014768A0A024R1R8 64 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 RPS6KA4O75676 772 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 KCNH1O95259 989 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 IL18BPO95998 194 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 CDK4P11802 303 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 RRADP55042 308 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 ANAPC15P60006 121 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 IGBP1P78318 339 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 SLC7A5Q01650 507 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 TCEA2Q15560 299 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 TBR1Q16650 682 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 PTPROQ16827 1216 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 C6orf15Q6UXA7 325 aaPredicted RBP5.49□□□□□ -1.53
VPS8-223ENST00000485024 ZNF662Q6ZS27 426 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 C16orf86Q6ZW13 317 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 ADGRG3Q86Y34 549 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 ZSWIM2Q8NEG5 633 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS8-223ENST00000485024 FANCLQ9NW38 375 aa5.49□□□□□ -1.53
VPS8-223ENST00000485024 ASH2LQ9UBL3 628 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms