RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 ENGASEQ8NFI3 743 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 AFAP1L1Q8TED9 768 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 AFG1LQ8WV93 481 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DHX58Q96C10 678 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC43Q96MW1 224 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 LRRC27Q9C0I9 530 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 SMARCAD1Q9H4L7 1026 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 PRDM10Q9NQV6 1147 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 ZNF302Q9NR11 478 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DACT1Q9NYF0 836 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 RGL1Q9NZL6 768 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DDX20Q9UHI6 824 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DNM3Q9UQ16 869 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 LOXHD1Q8IVV2 1947 aa10.09□□□□□ -0.79
SHROOM4-204ENST00000483955 DOCK5Q9H7D0 1870 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 GSTTP1A0A1W2PQM5 241 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 A6NJR5 290 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 CTAGE5O15320 804 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 DYNC1LI2O43237 492 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 ADCY6O43306 1168 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 ZEB2O60315 1214 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 KPNA6O60684 536 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PPFIA4O75335 1185 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 LGR5O75473 907 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SLITRK3O94933 977 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 LGALS2P05162 132 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 MYL1P05976 194 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SLFN14P0C7P3 912 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SPATA31C1P0DKV0 1188 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 XRCC6P12956 609 aaKnown RBP eCLIP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 CCND3P30281 292 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 GJA9P57773 515 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 NKX3-2P78367 333 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 AMPD3Q01432 767 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PRKCEQ02156 737 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SNW1Q13573 536 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 CTTNQ14247 550 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 E2F4Q16254 413 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 FSCN1Q16658 493 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 GJC2Q5T442 439 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 KRBA2Q6ZNG9 492 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PLPPR4Q7Z2D5 763 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 ELOA2Q8IYF1 753 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 LARP4BQ92615 738 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 GLG1Q92896 1179 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 NACC1Q96RE7 527 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 UPF3AQ9H1J1 476 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 NUP62CLQ9H1M0 184 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 TNMDQ9H2S6 317 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 ERAP1Q9NZ08 941 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 GABBR1Q9UBS5 961 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-204ENST00000483955 SYNRGQ9UMZ2 1314 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 A0A087X0B3 334 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 TRAK2O60296 914 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 EYA4O95677 639 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 OATP04181 439 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 STAT5BP51692 787 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 TMEM63BQ5T3F8 832 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 CCDC183Q5T5S1 534 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 SH3TC2Q8TF17 1288 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 RAD54LQ92698 747 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 ANKEF1Q9NU02 776 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 KCND2Q9NZV8 630 aa10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 DBR1Q9UK59 544 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-204ENST00000483955 ADAMTS4O75173 837 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 ECM1Q16610 540 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 UGCGQ16739 394 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 UTP14CQ5TAP6 766 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 RNF180Q86T96 592 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 SYT2Q8N9I0 419 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 ARMC5Q96C12 935 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 PCYT2Q99447 389 aa10.06□□□□□ -0.8
SHROOM4-204ENST00000483955 PLIN2Q99541 437 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms