RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GTF2F1P35269 517 aaKnown RBP eCLIP29.05■■■□□ 2.24
SHOX2-204ENST00000483851 GCLCP48506 637 aaPredicted RBP29.05■■■□□ 2.24
SHOX2-204ENST00000483851 CCNA1P78396 465 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 CACNB1Q02641 598 aaPredicted RBP29.05■■■□□ 2.24
SHOX2-204ENST00000483851 RAD51AP2Q09MP3 1159 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 CCL15Q16663 113 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 Q3C1V9 767 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 EPM2AIP1Q7L775 607 aaPredicted RBP29.05■■■□□ 2.24
SHOX2-204ENST00000483851 JPH1Q9HDC5 661 aaPredicted RBP29.05■■■□□ 2.24
SHOX2-204ENST00000483851 ANKEF1Q9NU02 776 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 DNAJC25-GNG10A0A024R161 153 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 FAM13AO94988 1023 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 BMT2Q1RMZ1 405 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 SPRYD7Q5W111 196 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 SFR1Q86XK3 245 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 SCFD1Q8WVM8 642 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 ZHX3Q9H4I2 956 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 SLC9A2Q9UBY0 812 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 PDHXO00330 501 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 TGFB3P10600 412 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 SKILP12757 684 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 LRRC41Q15345 812 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 MMP19Q99542 508 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 PARVGQ9HBI0 331 aa29.04■■■□□ 2.24
SHOX2-204ENST00000483851 PSAPP07602 524 aa29.03■■■□□ 2.24
SHOX2-204ENST00000483851 FKBP3Q00688 224 aaKnown RBP29.03■■■□□ 2.24
SHOX2-204ENST00000483851 GPRC5AQ8NFJ5 357 aa29.03■■■□□ 2.24
SHOX2-204ENST00000483851 SMCR8Q8TEV9 937 aaPredicted RBP29.03■■■□□ 2.24
SHOX2-204ENST00000483851 ATP6V0A1Q93050 837 aa29.03■■■□□ 2.24
SHOX2-204ENST00000483851 BTBD19C9JJ37 291 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 ZBTB39O15060 712 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 YWHABP31946 246 aaKnown RBP29.02■■■□□ 2.24
SHOX2-204ENST00000483851 RARRES1P49788 294 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 EDRF1Q3B7T1 1238 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 GLIS3Q8NEA6 775 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 CEP63Q96MT8 703 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 KCTD10Q9H3F6 313 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 EIF3DO15371 548 aaKnown RBP eCLIP29.02■■■□□ 2.24
SHOX2-204ENST00000483851 TEX33O43247 280 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 ARMCX5Q6P1M9 558 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 PADI6Q6TGC4 694 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 CCDC112Q8NEF3 446 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 BRI3BPQ8WY22 251 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 CNOT6LQ96LI5 555 aaKnown RBP29.02■■■□□ 2.24
SHOX2-204ENST00000483851 TRPM7Q96QT4 1865 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 TAB2Q9NYJ8 693 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 TBC1D7Q9P0N9 293 aa29.02■■■□□ 2.24
SHOX2-204ENST00000483851 LGALS16A8MUM7 142 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 ITGBL1O95965 494 aaPredicted RBP29.01■■■□□ 2.23
SHOX2-204ENST00000483851 CHADLQ6NUI6 762 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 KCNV1Q6PIU1 500 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 STXBP4Q6ZWJ1 553 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 ZNF507Q8TCN5 953 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 VPS16Q9H269 839 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 MORF4L1Q9UBU8 362 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 UBE4BO95155 1302 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 LRRC37A2A6NM11 1700 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 WDR81Q562E7 1941 aa29.01■■■□□ 2.23
SHOX2-204ENST00000483851 A0A1W2PQC6 194 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 GNA14O95837 355 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 LRRC55Q6ZSA7 311 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 ZC3H3Q8IXZ2 948 aaKnown RBP29■■■□□ 2.23
SHOX2-204ENST00000483851 TUBGCP2Q9BSJ2 902 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 MRPL44Q9H9J2 332 aaKnown RBP29■■■□□ 2.23
SHOX2-204ENST00000483851 TRAF3IP3Q9Y228 551 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29■■■□□ 2.23
SHOX2-204ENST00000483851 RSPH10B2B2RC85 870 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 RSPH10BP0C881 870 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 CYP2C8P10632 490 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 DNM2P50570 870 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 OTUD6AQ7L8S5 288 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 MORC4Q8TE76 937 aa29■■■□□ 2.23
SHOX2-204ENST00000483851 PDXKO00764 312 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 MAPTP10636 758 aaKnown RBP28.99■■■□□ 2.23
SHOX2-204ENST00000483851 TRIM14Q14142 442 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 KNOP1Q1ED39 458 aaKnown RBP28.99■■■□□ 2.23
SHOX2-204ENST00000483851 MIS18BP1Q6P0N0 1132 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 ABHD15Q6UXT9 468 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 MYCT1Q8N699 235 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 CCDC43Q96MW1 224 aaKnown RBP28.99■■■□□ 2.23
SHOX2-204ENST00000483851 FGFBP2Q9BYJ0 223 aa28.99■■■□□ 2.23
SHOX2-204ENST00000483851 ATG7O95352 703 aa28.98■■■□□ 2.23
SHOX2-204ENST00000483851 KCNJ6P48051 423 aa28.98■■■□□ 2.23
SHOX2-204ENST00000483851 ACTR2P61160 394 aa28.98■■■□□ 2.23
SHOX2-204ENST00000483851 NEDD9Q14511 834 aa28.98■■■□□ 2.23
SHOX2-204ENST00000483851 CST9Q5W186 159 aa28.98■■■□□ 2.23
SHOX2-204ENST00000483851 UGCGQ16739 394 aa28.97■■■□□ 2.23
SHOX2-204ENST00000483851 CREBRFQ8IUR6 639 aa28.97■■■□□ 2.23
SHOX2-204ENST00000483851 ABRAQ8N0Z2 381 aa28.97■■■□□ 2.23
SHOX2-204ENST00000483851 PARK7Q99497 189 aaKnown RBP28.97■■■□□ 2.23
SHOX2-204ENST00000483851 MTIF2P46199 727 aaKnown RBP28.97■■■□□ 2.23
SHOX2-204ENST00000483851 LARSQ9P2J5 1176 aaKnown RBP28.97■■■□□ 2.23
SHOX2-204ENST00000483851 ZNFX1Q9P2E3 1918 aaKnown RBP28.96■■■□□ 2.23
SHOX2-204ENST00000483851 STRNO43815 780 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 MARSP56192 900 aaKnown RBP28.96■■■□□ 2.23
SHOX2-204ENST00000483851 UBXN1Q04323 297 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 FSTL1Q12841 308 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 ALCAMQ13740 583 aa28.96■■■□□ 2.23
SHOX2-204ENST00000483851 SEPT14Q6ZU15 432 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms