RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 PPARGC1AQ9UBK2 798 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SUFUQ9UMX1 484 aa10.29□□□□□ -0.76
CDK5RAP2-216ENST00000483412 CCNE1P24864 410 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 FKBP3Q00688 224 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 C1orf146Q5VVC0 180 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SPOPLQ6IQ16 392 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 FBXO11Q86XK2 927 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 CRLF3Q8IUI8 442 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 KCTD6Q8NC69 237 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 TRIM55Q9BYV6 548 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 ZNF408Q9H9D4 720 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SRP68Q9UHB9 627 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 USP31Q70CQ4 1352 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PFDN6O15212 129 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 RWDD2BP57060 319 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 BBS9Q3SYG4 887 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SH3GL3Q99963 347 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 MLXIPLQ9NP71 852 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 DBNLQ9UJU6 430 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 XDHP47989 1333 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 RAD23BP54727 409 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PRKG1Q13976 671 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 CENPUQ71F23 418 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 ARMC2Q8NEN0 867 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 CCDC124Q96CT7 223 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 TRIM15Q9C019 465 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 STOML1Q9UBI4 398 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SNX24Q9Y343 169 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 H0YCG3 227 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SCNN1DP51172 638 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 RESP18Q5W5W9 173 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 C4orf50Q6ZRC1 276 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 EPM2AIP1Q7L775 607 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SRLQ86TD4 932 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 NUDCD3Q8IVD9 361 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SKA2Q8WVK7 121 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SAYSD1Q9NPB0 183 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 ANGPTL3Q9Y5C1 460 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PTPRMP28827 1452 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 MYL1P05976 194 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SRGAP2BP0DMP2 458 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 KITP10721 976 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PCGF5Q86SE9 256 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 ZC4H2Q9NQZ6 224 aa10.28□□□□□ -0.76
CDK5RAP2-216ENST00000483412 LRRIQ4A6NIV6 560 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 DNAJC6O75061 913 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 GAP43P17677 238 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 PLCG1P19174 1290 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 NBPF3Q9H094 633 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.27□□□□□ -0.761e-6■■■■■ 31.8
CDK5RAP2-216ENST00000483412 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 DIP2BQ9P265 1576 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 DLC1Q96QB1 1528 aa10.27□□□□□ -0.76
CDK5RAP2-216ENST00000483412 RASA4BC9J798 803 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 NVLO15381 856 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 RASA4O43374 803 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 OCA2Q04671 838 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 ATP6V1E2Q96A05 226 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 TRPV6Q9H1D0 765 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 GPR108Q9NPR9 543 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 CCDC188H7C350 402 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 MEIS1O00470 390 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 POLGP54098 1239 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 PMS2P54278 862 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 TMPRSS15P98073 1019 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 UBE3CQ15386 1083 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 SESTD1Q86VW0 696 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 DNAAF3Q8N9W5 541 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 HOOK2Q96ED9 719 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 NCK2O43639 380 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 ZBTB41Q5SVQ8 909 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 CCNYQ8ND76 341 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 CHURC1Q8WUH1 139 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 ATG3Q9NT62 314 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 MRPL11Q9Y3B7 192 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 MED14O60244 1454 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 PCYT1AP49585 367 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 DNAJC24Q6P3W2 148 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 MYLK4Q86YV6 388 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 AIFM3Q96NN9 605 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 ACCSQ96QU6 501 aa10.27□□□□□ -0.77
CDK5RAP2-216ENST00000483412 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP2-216ENST00000483412 ALAS1P13196 640 aa10.26□□□□□ -0.77
CDK5RAP2-216ENST00000483412 BTDP43251 543 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms