RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KCNQ2O43526 872 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 TSPAN6O43657 245 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 MYO1BO43795 1136 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 NEMFO60524 1076 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 DEXIO95424 95 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 BMP15O95972 392 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 MYL1P05976 194 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 BDNFP23560 247 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 U2AF2P26368 475 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNX13-208ENST00000482558 CDC25BP30305 580 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 HIBADHP31937 336 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 CD68P34810 354 aaPredicted RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 ZNF165P49910 485 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 TPM4P67936 248 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 RBM6P78332 1123 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 GSTO1P78417 241 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 KIF23Q02241 960 aaPredicted RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 PPARAQ07869 468 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 SLC39A14Q15043 492 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 NFE2Q16621 373 aaPredicted RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 ANO1Q5XXA6 986 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 PPP4R4Q6NUP7 873 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 FAM173BQ6P4H8 233 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 SARM1Q6SZW1 724 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 CYB5R4Q7L1T6 521 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 IQCA1Q86XH1 822 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 RAVER1Q8IY67 606 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 CEP57L1Q8IYX8 460 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 FSIP1Q8NA03 581 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 ENGASEQ8NFI3 743 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 BPIFA3Q9BQP9 254 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 CRNKL1Q9BZJ0 848 aaKnown RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 FOXP1Q9H334 677 aaPredicted RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 ARMT1Q9H993 441 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 LATS2Q9NRM7 1088 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 ZSWIM5Q9P217 1185 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 CCNL1Q9UK58 526 aaPredicted RBP8.77□□□□□ -1.01
SNX13-208ENST00000482558 DUOX1Q9NRD9 1551 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 CHD4Q14839 1912 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 A0A0G2JLW4 131 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 FAM237AA0A1B0GTK4 181 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 DDAH1O94760 285 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 LDHCP07864 332 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 CNGA1P29973 690 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 RFC4P35249 363 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 CDKN1CP49918 316 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 SNW1Q13573 536 aaKnown RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 NTRK3Q16288 839 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 ANO6Q4KMQ2 910 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 SBK1Q52WX2 424 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 RILPL1Q5EBL4 403 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 KRT40Q6A162 431 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 TRIM42Q8IWZ5 723 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 LCORLQ8N3X6 602 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 FAM84BQ96KN1 310 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 MYRFLQ96LU7 910 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 SDF4Q9BRK5 362 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 EHD4Q9H223 541 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 ARPP21Q9UBL0 812 aaPredicted RBP8.76□□□□□ -1.01
SNX13-208ENST00000482558 PRKAG3Q9UGI9 489 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 ADGRE2Q9UHX3 823 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 PCDHA7Q9UN72 937 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 EFR3BQ9Y2G0 817 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 ATP8A1Q9Y2Q0 1164 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 NEDD4P46934 1319 aa8.76□□□□□ -1.01
SNX13-208ENST00000482558 C4AP0C0L4 1744 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 C4BP0C0L5 1744 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 SMTNL1A8MU46 457 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 BECN2A8MW95 431 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 ORC4O43929 436 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 CUTAO60888 179 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 WISP1O95388 367 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 PDE4BQ07343 736 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 CAMK4Q16566 473 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 SYCP2LQ5T4T6 812 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 TBC1D9BQ66K14 1250 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 ACAD11Q709F0 780 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 CATIPQ7Z7H3 387 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 PCGF5Q86SE9 256 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 MICU3Q86XE3 530 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 PIBF1Q8WXW3 757 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 PPM1EQ8WY54 764 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 SLC39A13Q96H72 371 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 MAP3K14Q99558 947 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 RIOK1Q9BRS2 568 aaKnown RBP8.75□□□□□ -1.01
SNX13-208ENST00000482558 ZNF287Q9HBT7 754 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 CBX8Q9HC52 389 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 BRMS1Q9HCU9 246 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms