RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KPNA6O60684 536 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 P4HBP07237 508 aaKnown RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 UBA7P41226 1012 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 QARSP47897 775 aaKnown RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 PSMC5P62195 406 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 NKX3-2P78367 333 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 PDIA5Q14554 519 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 KARSQ15046 597 aaKnown RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 PLCB4Q15147 1175 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 ECM1Q16610 540 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 CATSPER3Q86XQ3 398 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 PIGOQ8TEQ8 1089 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 TRAPPC12Q8WVT3 735 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 MMTAG2Q9BU76 263 aaKnown RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 KATNAL1Q9BW62 490 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 C11orf49Q9H6J7 331 aa14.82□□□□□ -0.04
HDAC1-208ENST00000482310 BMP2KQ9NSY1 1161 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 DDX19AQ9NUU7 478 aaKnown RBP14.82□□□□□ -0.04
HDAC1-208ENST00000482310 SLITRK3O94933 977 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 OATP04181 439 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 SMIM10L2AP0DMW4 78 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 SMIM10L2BP0DMW5 78 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 ATP4AP20648 1035 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 TXLNAP40222 546 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 MTERF2Q49AM1 385 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 AXDND1Q5T1B0 1012 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-208ENST00000482310 SHC4Q6S5L8 630 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 PDILTQ8N807 584 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 C7orf31Q8N865 590 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 ANKLE1Q8NAG6 615 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 NEK9Q8TD19 979 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 ZBTB10Q96DT7 871 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 CCDC43Q96MW1 224 aaKnown RBP14.81□□□□□ -0.04
HDAC1-208ENST00000482310 KIAA1024Q9UPX6 916 aa14.81□□□□□ -0.04
HDAC1-208ENST00000482310 MAFBQ9Y5Q3 323 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-208ENST00000482310 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-208ENST00000482310 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 SPATA31C1P0DKV0 1188 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 ZNF200P98182 395 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-208ENST00000482310 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 GRB10Q13322 594 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 DHX8Q14562 1220 aaKnown RBP14.8□□□□□ -0.04
HDAC1-208ENST00000482310 PLPPR4Q7Z2D5 763 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 NECAB2Q7Z6G3 386 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 CALML4Q96GE6 196 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 AK8Q96MA6 479 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 HSD17B14Q9BPX1 270 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 POLR3CQ9BUI4 534 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-208ENST00000482310 ZSWIM4Q9H7M6 989 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 TUFT1Q9NNX1 390 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 HDAC6Q9UBN7 1215 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 GRIN2DO15399 1336 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 KDM3AQ9Y4C1 1321 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 SIP14410 1827 aa14.8□□□□□ -0.04
HDAC1-208ENST00000482310 A0A087X0B3 334 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 A0A1B0GVL5 298 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 E9PMD0 336 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 HAS3O00219 553 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 PQBP1O60828 265 aaKnown RBP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 CABYRO75952 493 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 SSBP05455 408 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 INSRRP14616 1297 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 PLCG1P19174 1290 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 RPA1P27694 616 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 YWHABP31946 246 aaKnown RBP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC1-208ENST00000482310 NPEPPSP55786 919 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 GRIK4Q16099 956 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 CSPP1Q1MSJ5 1256 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 XKR9Q5GH70 373 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 KCNK18Q7Z418 384 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 FSIP1Q8NA03 581 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 GBP4Q96PP9 640 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 PNMA5Q96PV4 448 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 SETD4Q9NVD3 440 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
HDAC1-208ENST00000482310 SCN5AQ14524 2016 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 DKC1O60832 514 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC1-208ENST00000482310 PRPF40AO75400 957 aaKnown RBP14.78□□□□□ -0.04
HDAC1-208ENST00000482310 HIC1Q14526 733 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 LRRC26Q2I0M4 334 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 RESP18Q5W5W9 173 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 GDF6Q6KF10 455 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-208ENST00000482310 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 ANO5Q75V66 913 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
HDAC1-208ENST00000482310 LRRC15Q8TF66 581 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 LMBR1Q8WVP7 490 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 BBXQ8WY36 941 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-208ENST00000482310 DHX58Q96C10 678 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 FAM167AQ96KS9 214 aa14.78□□□□□ -0.04
HDAC1-208ENST00000482310 CEP170P1Q96L14 293 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms